Gene : Thhalv10028578m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11647:SF4 - ALLANTOINASE Genomic Order:  404
Name:  ? Thhalv10028578m.g Secondary Identifier:  ? PAC:20197305
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5692 Eutrema salsugineum pathologic  
Esalsugineum PWY-5698 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10028578m.g 0.5kb upstream 0.5kb upstream 4249 true scaffold_3: 2139858-2144106 Eutrema salsugineum
Thhalv10028578m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2139858-2140357 Eutrema salsugineum
Thhalv10028578m.g 0.5kb downstream 0.5kb downstream 4249 true scaffold_3: 2140358-2144606 Eutrema salsugineum
Thhalv10028578m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2144107-2144606 Eutrema salsugineum
Thhalv10028578m.g 1.0kb upstream 1.0kb upstream 4749 true scaffold_3: 2139358-2144106 Eutrema salsugineum
Thhalv10028578m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2139358-2140357 Eutrema salsugineum
Thhalv10028578m.g 1.0kb downstream 1.0kb downstream 4749 true scaffold_3: 2140358-2145106 Eutrema salsugineum
Thhalv10028578m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2144107-2145106 Eutrema salsugineum
Thhalv10028578m.g 2.0kb upstream 2.0kb upstream 5749 true scaffold_3: 2138358-2144106 Eutrema salsugineum
Thhalv10028578m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2138358-2140357 Eutrema salsugineum
Thhalv10028578m.g 2.0kb downstream 2.0kb downstream 5749 true scaffold_3: 2140358-2146106 Eutrema salsugineum
Thhalv10028578m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2144107-2146106 Eutrema salsugineum
Thhalv10028578m.g 5.0kb upstream 5.0kb upstream 8749 true scaffold_3: 2135358-2144106 Eutrema salsugineum
Thhalv10028578m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2135358-2140357 Eutrema salsugineum
Thhalv10028578m.g 5.0kb downstream 5.0kb downstream 8749 true scaffold_3: 2140358-2149106 Eutrema salsugineum
Thhalv10028578m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2144107-2149106 Eutrema salsugineum
Thhalv10028578m.g 10.0kb upstream 10.0kb upstream 13749 true scaffold_3: 2130358-2144106 Eutrema salsugineum
Thhalv10028578m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2130358-2140357 Eutrema salsugineum
Thhalv10028578m.g 10.0kb downstream 10.0kb downstream 13749 true scaffold_3: 2140358-2154106 Eutrema salsugineum
Thhalv10028578m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2144107-2154106 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367537 5261 Brassicaceae View MSA
123833382 5264 Brassicales-Malvales View MSA
124338485 5266 SBM View MSA
124243507 5268 Malvidae View MSA
124050305 5270 Rosid View MSA
123738964 5271 Pentapetalae View MSA
122792527 5272 Eudicot View MSA
122045027 5273 Angiosperm View MSA
121345970 5274 Embryophyte View MSA
123425044 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain