Gene : Thhalv10013859m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR23382:SF5 - MALATE DEHYDROGENASE Genomic Order:  2422
Name:  ? Thhalv10013859m.g Secondary Identifier:  ? PAC:20205851
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum GLUCONEO-PWY Eutrema salsugineum pathologic  
Esalsugineum GLYOXYLATE-BYPASS Eutrema salsugineum pathologic  
Esalsugineum PWY-5464 Eutrema salsugineum pathologic  
Esalsugineum PWY-561 Eutrema salsugineum pathologic  
Esalsugineum PWY-5690 Eutrema salsugineum pathologic  
Esalsugineum PWY66-399 Eutrema salsugineum pathologic  
Esalsugineum PWY-7115 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10013859m.g 0.5kb upstream 0.5kb upstream 1828 true scaffold_2: 9736875-9738702 Eutrema salsugineum
Thhalv10013859m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 9738203-9738702 Eutrema salsugineum
Thhalv10013859m.g 0.5kb downstream 0.5kb downstream 1828 true scaffold_2: 9736375-9738202 Eutrema salsugineum
Thhalv10013859m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 9736375-9736874 Eutrema salsugineum
Thhalv10013859m.g 1.0kb upstream 1.0kb upstream 2328 true scaffold_2: 9736875-9739202 Eutrema salsugineum
Thhalv10013859m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 9738203-9739202 Eutrema salsugineum
Thhalv10013859m.g 1.0kb downstream 1.0kb downstream 2328 true scaffold_2: 9735875-9738202 Eutrema salsugineum
Thhalv10013859m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 9735875-9736874 Eutrema salsugineum
Thhalv10013859m.g 2.0kb upstream 2.0kb upstream 3328 true scaffold_2: 9736875-9740202 Eutrema salsugineum
Thhalv10013859m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 9738203-9740202 Eutrema salsugineum
Thhalv10013859m.g 2.0kb downstream 2.0kb downstream 3328 true scaffold_2: 9734875-9738202 Eutrema salsugineum
Thhalv10013859m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 9734875-9736874 Eutrema salsugineum
Thhalv10013859m.g 5.0kb upstream 5.0kb upstream 6328 true scaffold_2: 9736875-9743202 Eutrema salsugineum
Thhalv10013859m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 9738203-9743202 Eutrema salsugineum
Thhalv10013859m.g 5.0kb downstream 5.0kb downstream 6328 true scaffold_2: 9731875-9738202 Eutrema salsugineum
Thhalv10013859m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 9731875-9736874 Eutrema salsugineum
Thhalv10013859m.g 10.0kb upstream 10.0kb upstream 11328 true scaffold_2: 9736875-9748202 Eutrema salsugineum
Thhalv10013859m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 9738203-9748202 Eutrema salsugineum
Thhalv10013859m.g 10.0kb downstream 10.0kb downstream 11328 true scaffold_2: 9726875-9738202 Eutrema salsugineum
Thhalv10013859m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 9726875-9736874 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361174 5261 Brassicaceae View MSA
123830714 5264 Brassicales-Malvales View MSA
124349239 5266 SBM View MSA
124248989 5268 Malvidae View MSA
124071542 5270 Rosid View MSA
123746984 5271 Pentapetalae View MSA
122786587 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain