Gene : Thhalv10006083m.g E. salsugineum v1.0
Defline:  (1 of 2) 1.17.1.8//1.3.1.26 - 4-hydroxy-tetrahydrodipicolinate reductase / Dihydrodipicolinate reductase Genomic Order:  330
Name:  ? Thhalv10006083m.g Secondary Identifier:  ? PAC:20190629
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-5097 Eutrema salsugineum pathologic  
Esalsugineum PWY-724 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10006083m.g 0.5kb upstream 0.5kb upstream 2565 true scaffold_19: 1279724-1282288 Eutrema salsugineum
Thhalv10006083m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_19: 1279724-1280223 Eutrema salsugineum
Thhalv10006083m.g 0.5kb downstream 0.5kb downstream 2565 true scaffold_19: 1280224-1282788 Eutrema salsugineum
Thhalv10006083m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_19: 1282289-1282788 Eutrema salsugineum
Thhalv10006083m.g 1.0kb upstream 1.0kb upstream 3065 true scaffold_19: 1279224-1282288 Eutrema salsugineum
Thhalv10006083m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_19: 1279224-1280223 Eutrema salsugineum
Thhalv10006083m.g 1.0kb downstream 1.0kb downstream 3065 true scaffold_19: 1280224-1283288 Eutrema salsugineum
Thhalv10006083m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_19: 1282289-1283288 Eutrema salsugineum
Thhalv10006083m.g 2.0kb upstream 2.0kb upstream 4065 true scaffold_19: 1278224-1282288 Eutrema salsugineum
Thhalv10006083m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_19: 1278224-1280223 Eutrema salsugineum
Thhalv10006083m.g 2.0kb downstream 2.0kb downstream 4065 true scaffold_19: 1280224-1284288 Eutrema salsugineum
Thhalv10006083m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_19: 1282289-1284288 Eutrema salsugineum
Thhalv10006083m.g 5.0kb upstream 5.0kb upstream 7065 true scaffold_19: 1275224-1282288 Eutrema salsugineum
Thhalv10006083m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_19: 1275224-1280223 Eutrema salsugineum
Thhalv10006083m.g 5.0kb downstream 5.0kb downstream 7065 true scaffold_19: 1280224-1287288 Eutrema salsugineum
Thhalv10006083m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_19: 1282289-1287288 Eutrema salsugineum
Thhalv10006083m.g 10.0kb upstream 10.0kb upstream 12065 true scaffold_19: 1270224-1282288 Eutrema salsugineum
Thhalv10006083m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_19: 1270224-1280223 Eutrema salsugineum
Thhalv10006083m.g 10.0kb downstream 10.0kb downstream 12065 true scaffold_19: 1280224-1292288 Eutrema salsugineum
Thhalv10006083m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_19: 1282289-1292288 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377187 5261 Brassicaceae View MSA
123835164 5264 Brassicales-Malvales View MSA
124339702 5266 SBM View MSA
124251630 5268 Malvidae View MSA
124061007 5270 Rosid View MSA
123740937 5271 Pentapetalae View MSA
122785919 5272 Eudicot View MSA
122046782 5273 Angiosperm View MSA
121345687 5274 Embryophyte View MSA
123424298 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain