Gene : Thhalv10011087m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR15184:SF43 - ATP SYNTHASE SUBUNIT BETA, CHLOROPLASTIC Genomic Order:  970
Name:  ? Thhalv10011087m.g Secondary Identifier:  ? PAC:20206830
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6126 Eutrema salsugineum pathologic  
Esalsugineum PWY-7219 Eutrema salsugineum pathologic  
Esalsugineum PWY-7229 Eutrema salsugineum pathologic  
Esalsugineum PWY-841 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011087m.g 0.5kb upstream 0.5kb upstream 2287 true scaffold_16: 5910473-5912759 Eutrema salsugineum
Thhalv10011087m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 5910473-5910972 Eutrema salsugineum
Thhalv10011087m.g 0.5kb downstream 0.5kb downstream 2287 true scaffold_16: 5910973-5913259 Eutrema salsugineum
Thhalv10011087m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 5912760-5913259 Eutrema salsugineum
Thhalv10011087m.g 1.0kb upstream 1.0kb upstream 2787 true scaffold_16: 5909973-5912759 Eutrema salsugineum
Thhalv10011087m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 5909973-5910972 Eutrema salsugineum
Thhalv10011087m.g 1.0kb downstream 1.0kb downstream 2787 true scaffold_16: 5910973-5913759 Eutrema salsugineum
Thhalv10011087m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 5912760-5913759 Eutrema salsugineum
Thhalv10011087m.g 2.0kb upstream 2.0kb upstream 3787 true scaffold_16: 5908973-5912759 Eutrema salsugineum
Thhalv10011087m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 5908973-5910972 Eutrema salsugineum
Thhalv10011087m.g 2.0kb downstream 2.0kb downstream 3787 true scaffold_16: 5910973-5914759 Eutrema salsugineum
Thhalv10011087m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 5912760-5914759 Eutrema salsugineum
Thhalv10011087m.g 5.0kb upstream 5.0kb upstream 6787 true scaffold_16: 5905973-5912759 Eutrema salsugineum
Thhalv10011087m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 5905973-5910972 Eutrema salsugineum
Thhalv10011087m.g 5.0kb downstream 5.0kb downstream 6787 true scaffold_16: 5910973-5917759 Eutrema salsugineum
Thhalv10011087m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 5912760-5917759 Eutrema salsugineum
Thhalv10011087m.g 10.0kb upstream 10.0kb upstream 11787 true scaffold_16: 5900973-5912759 Eutrema salsugineum
Thhalv10011087m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 5900973-5910972 Eutrema salsugineum
Thhalv10011087m.g 10.0kb downstream 10.0kb downstream 11787 true scaffold_16: 5910973-5922759 Eutrema salsugineum
Thhalv10011087m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 5912760-5922759 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122357533 5261 Brassicaceae Singleton cluster - no MSA
123838703 5264 Brassicales-Malvales View MSA
124322489 5266 SBM View MSA
124250549 5268 Malvidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain