Gene : Thhalv10010252m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11089:SF43 - NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  862
Name:  ? Thhalv10010252m.g Secondary Identifier:  ? PAC:20206831
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum PWY-6845 Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10010252m.g 0.5kb upstream 0.5kb upstream 3664 true scaffold_16: 4429630-4433293 Eutrema salsugineum
Thhalv10010252m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_16: 4429630-4430129 Eutrema salsugineum
Thhalv10010252m.g 0.5kb downstream 0.5kb downstream 3664 true scaffold_16: 4430130-4433793 Eutrema salsugineum
Thhalv10010252m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_16: 4433294-4433793 Eutrema salsugineum
Thhalv10010252m.g 1.0kb upstream 1.0kb upstream 4164 true scaffold_16: 4429130-4433293 Eutrema salsugineum
Thhalv10010252m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_16: 4429130-4430129 Eutrema salsugineum
Thhalv10010252m.g 1.0kb downstream 1.0kb downstream 4164 true scaffold_16: 4430130-4434293 Eutrema salsugineum
Thhalv10010252m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_16: 4433294-4434293 Eutrema salsugineum
Thhalv10010252m.g 2.0kb upstream 2.0kb upstream 5164 true scaffold_16: 4428130-4433293 Eutrema salsugineum
Thhalv10010252m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_16: 4428130-4430129 Eutrema salsugineum
Thhalv10010252m.g 2.0kb downstream 2.0kb downstream 5164 true scaffold_16: 4430130-4435293 Eutrema salsugineum
Thhalv10010252m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_16: 4433294-4435293 Eutrema salsugineum
Thhalv10010252m.g 5.0kb upstream 5.0kb upstream 8164 true scaffold_16: 4425130-4433293 Eutrema salsugineum
Thhalv10010252m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_16: 4425130-4430129 Eutrema salsugineum
Thhalv10010252m.g 5.0kb downstream 5.0kb downstream 8164 true scaffold_16: 4430130-4438293 Eutrema salsugineum
Thhalv10010252m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_16: 4433294-4438293 Eutrema salsugineum
Thhalv10010252m.g 10.0kb upstream 10.0kb upstream 13164 true scaffold_16: 4420130-4433293 Eutrema salsugineum
Thhalv10010252m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_16: 4420130-4430129 Eutrema salsugineum
Thhalv10010252m.g 10.0kb downstream 10.0kb downstream 13164 true scaffold_16: 4430130-4443293 Eutrema salsugineum
Thhalv10010252m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_16: 4433294-4443293 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374132 5261 Brassicaceae View MSA
123833305 5264 Brassicales-Malvales View MSA
124342471 5266 SBM View MSA
124243451 5268 Malvidae View MSA
124065366 5270 Rosid View MSA
123739170 5271 Pentapetalae View MSA
122792557 5272 Eudicot View MSA
122045244 5273 Angiosperm View MSA
121346425 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain