Gene : Thhalv10025142m.g E. salsugineum v1.0
Defline:  (1 of 1) PTHR11879:SF1 - ASPARTATE AMINOTRANSFERASE, CHLOROPLASTIC Genomic Order:  805
Name:  ? Thhalv10025142m.g Secondary Identifier:  ? PAC:20196092
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Esalsugineum ASPARTATE-DEG1-PWY Eutrema salsugineum pathologic  
Esalsugineum ASPARTATESYN-PWY Eutrema salsugineum pathologic  
Esalsugineum PWY-3001 Eutrema salsugineum pathologic  
Esalsugineum PWY-7115 Eutrema salsugineum pathologic  
Esalsugineum PWY-7117 Eutrema salsugineum pathologic  
Esalsugineum THRESYN-PWY Eutrema salsugineum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10025142m.g 0.5kb upstream 0.5kb upstream 3547 true scaffold_1: 3398095-3401641 Eutrema salsugineum
Thhalv10025142m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3398095-3398594 Eutrema salsugineum
Thhalv10025142m.g 0.5kb downstream 0.5kb downstream 3547 true scaffold_1: 3398595-3402141 Eutrema salsugineum
Thhalv10025142m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3401642-3402141 Eutrema salsugineum
Thhalv10025142m.g 1.0kb upstream 1.0kb upstream 4047 true scaffold_1: 3397595-3401641 Eutrema salsugineum
Thhalv10025142m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3397595-3398594 Eutrema salsugineum
Thhalv10025142m.g 1.0kb downstream 1.0kb downstream 4047 true scaffold_1: 3398595-3402641 Eutrema salsugineum
Thhalv10025142m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3401642-3402641 Eutrema salsugineum
Thhalv10025142m.g 2.0kb upstream 2.0kb upstream 5047 true scaffold_1: 3396595-3401641 Eutrema salsugineum
Thhalv10025142m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3396595-3398594 Eutrema salsugineum
Thhalv10025142m.g 2.0kb downstream 2.0kb downstream 5047 true scaffold_1: 3398595-3403641 Eutrema salsugineum
Thhalv10025142m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3401642-3403641 Eutrema salsugineum
Thhalv10025142m.g 5.0kb upstream 5.0kb upstream 8047 true scaffold_1: 3393595-3401641 Eutrema salsugineum
Thhalv10025142m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3393595-3398594 Eutrema salsugineum
Thhalv10025142m.g 5.0kb downstream 5.0kb downstream 8047 true scaffold_1: 3398595-3406641 Eutrema salsugineum
Thhalv10025142m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3401642-3406641 Eutrema salsugineum
Thhalv10025142m.g 10.0kb upstream 10.0kb upstream 13047 true scaffold_1: 3388595-3401641 Eutrema salsugineum
Thhalv10025142m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3388595-3398594 Eutrema salsugineum
Thhalv10025142m.g 10.0kb downstream 10.0kb downstream 13047 true scaffold_1: 3398595-3411641 Eutrema salsugineum
Thhalv10025142m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3401642-3411641 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376883 5261 Brassicaceae View MSA
123833369 5264 Brassicales-Malvales View MSA
124341327 5266 SBM View MSA
124241276 5268 Malvidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain