Protein Domain : IPR019474

Type:  Domain Name:  Ubiquitin conjugation factor E4, core
Description:  This entry represents the most conserved part of the core region of ubiquitin conjugation factor E4 (or Ub elongating factor, or Ufd2P), running from helix alpha-11 to alpha-38. It consists of 31 helices of variable length connected by loops of variable size forming a compact unit; the helical packing pattern of the compact unit consists of five structural repeats that resemble tandem Armadillo (ARM) repeats. This domain is involved in ubiquitination as it binds Cdc48p and escorts ubiquitinated proteins from Cdc48p to the proteasome for degradation. The core is structurally similar to the nuclear transporter protein importin-alpha. The core is associated with the U-box at the C terminus, (), which has ligase activity. Ubiquitin conjugation factor E4 is involved in N-terminal ubiquitin fusion degradation proteolytic pathway (UFD pathway). E4 binds to the ubiquitin moieties of preformed conjugates and catalyses ubiquitin chain assembly in conjunction with E1, E2, and E3. E4 appears to influence the formation and topology of the multi-Ub chain as it enhances ubiquitination at 'Lys-48' but not at 'Lys-29' of the N-terminal Ub moiety. Short Name:  Ub_conjug_fac_E4_core

0 Child Features

0 Contains

1 Cross References

Identifier
PF10408

0 Found In

4 GO Annotations

GO Term Gene Name
GO:0034450 IPR019474
GO:0006511 IPR019474
GO:0016567 IPR019474
GO:0000151 IPR019474

4 Ontology Annotations

GO Term Gene Name
GO:0034450 IPR019474
GO:0006511 IPR019474
GO:0016567 IPR019474
GO:0000151 IPR019474

0 Parent Features

823 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
142432 D8QZQ6 PAC:15412612 Selaginella moellendorffii 1015  
evm.model.supercontig_14.139 PAC:16408635 Carica papaya 944  
29719.m000324 B9SRQ3 PAC:16806523 Ricinus communis 1348  
28124.m000236 B9T3S8 PAC:16799975 Ricinus communis 1031  
Cucsa.338520.1 A0A0A0LCQ5 PAC:16978763 Cucumis sativus 1043  
Cucsa.101690.1 A0A0A0KL07 PAC:16958741 Cucumis sativus 1270  
orange1.1g001866m A0A067G2W1 PAC:18135132 Citrus sinensis 1002  
orange1.1g002404m A0A067GBH6 PAC:18135134 Citrus sinensis 927  
orange1.1g002813m A0A067GB46 PAC:18135135 Citrus sinensis 877  
orange1.1g002017m A0A067FZA8 PAC:18135133 Citrus sinensis 981  
orange1.1g001583m A0A067FZE7 PAC:18135131 Citrus sinensis 1049  
orange1.1g001040m A0A067F8X1 PAC:18091056 Citrus sinensis 1178  
orange1.1g000809m A0A067F9Q1 PAC:18091054 Citrus sinensis 1273  
AT5G15400.1 Q9LF41 PAC:19673174 Arabidopsis thaliana 1038  
AT2G22010.1 Q9SIZ8 PAC:19640085 Arabidopsis thaliana 1280  
AT2G22010.2 F4IIK4 PAC:19640084 Arabidopsis thaliana 1283  
Thhalv10000015m V4L6W7 PAC:20208825 Eutrema salsugineum 1250  
Thhalv10012542m V4LCW7 PAC:20204245 Eutrema salsugineum 1036  
Ciclev10011113m V4SUR6 PAC:20797307 Citrus clementina 779  
Ciclev10011161m V4SAC4 PAC:20797308 Citrus clementina 732  
Ciclev10010973m V4SAC0 PAC:20797306 Citrus clementina 1002  
Ciclev10011388m V4SZG4 PAC:20797310 Citrus clementina 564  
Ciclev10011387m V4SZG4 PAC:20797309 Citrus clementina 564  
Ciclev10010958m V4UXH1 PAC:20797305 Citrus clementina 1049  
Ciclev10024728m V4UP70 PAC:20801330 Citrus clementina 1273  
Ciclev10024780m V4SVU6 PAC:20801331 Citrus clementina 1047  
Ciclev10024785m V4SQU0 PAC:20801332 Citrus clementina 1039  
Lus10030697 PAC:23155322 Linum usitatissimum 941  
Lus10035857 PAC:23147422 Linum usitatissimum 1252  
Lus10005222 PAC:23155680 Linum usitatissimum 972  

0 Publications