Protein Domain : IPR020838

Type:  Domain Name:  DBINO domain
Description:  Proteins belonging to the SNF2 family of DNA dependent ATPases are important members of the chromatin remodelling complexes that are implicated in epigenetic control of gene expression. Members of the SNF2 family of proteins have been identified in organisms ranging from Escherichia colito Homo sapiens(Human). All of them contain the conserved SNF2 domain, which is defined by the existence of seven motifs (I, Ia, and II-VI) with sequences similarity to those motifs found in DNA and RNA helicases (see ). SNF2-like family members can be further subdivided into several subfamilies according to the presence of protein motifs outside of the ATPase region. The DBINO (DNA binding domain of INO80) domain is characteristic of the INO80 subfamily and is predicted to have DNA-binding function. The DBINO domain is a 126 amino acid long peptide located near the N terminus, approximately 100 residues upstream of the SNF2 helicase domain. The presence of this domain in all the INO80 subfamily proteins from yeast to humans suggests its conserved function in evolution [, ].The most significant feature of DBINO domain is the occurrence of the positive amino acids arginine and lysine in tandem (RK/KR), in multiple positions, which are likely to bind DNA []. Short Name:  DBINO

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF13892
PS51413

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0016817 IPR020838

1 Ontology Annotations

GO Term Gene Name
GO:0016817 IPR020838

0 Parent Features

804 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
444050 D8S6W1 PAC:15413673 Selaginella moellendorffii 1426  
evm.model.supercontig_182.16 PAC:16411566 Carica papaya 1471  
29726.m004000 B9RT10 PAC:16806712 Ricinus communis 1064  
29634.m002161 B9S6I7 PAC:16804302 Ricinus communis 788  
29344.m000107 B9T6H9 PAC:16802741 Ricinus communis 1339  
Cucsa.017850.2 PAC:16951750 Cucumis sativus 1270  
Cucsa.017850.1 PAC:16951749 Cucumis sativus 1506  
orange1.1g042305m A0A067G6B1 PAC:18105626 Citrus sinensis 1055  
orange1.1g000994m A0A067EAK6 PAC:18134263 Citrus sinensis 1196  
orange1.1g000642m A0A067EBF2 PAC:18134262 Citrus sinensis 1377  
AT3G57300.2 F4J277 PAC:19659598 Arabidopsis thaliana 1540  
AT3G57300.1 Q8RXS6 PAC:19659599 Arabidopsis thaliana 1507  
Thhalv10019967m V4LZW5 PAC:20183011 Eutrema salsugineum 1052  
Thhalv10005740m V4LWS5 PAC:20190497 Eutrema salsugineum 1559  
Ciclev10004220m V4S7K8 PAC:20791062 Citrus clementina 1067  
Ciclev10004175m V4S6E0 PAC:20791706 Citrus clementina 1243  
Ciclev10004142m V4U5A7 PAC:20791705 Citrus clementina 1524  
Ciclev10004222m V4S2C5 PAC:20791063 Citrus clementina 1064  
Lus10035436 PAC:23170502 Linum usitatissimum 1418  
Lus10031050 PAC:23166741 Linum usitatissimum 1575  
Potri.016G043500.1 PAC:27012514 Populus trichocarpa 1535  
Potri.016G043500.2 A0A2K1XAK8 PAC:27012515 Populus trichocarpa 1478  
Potri.010G019800.1 A0A2K1YMH9 PAC:26982069 Populus trichocarpa 1059  
Potri.010G019800.3 A0A2K1YMI9 PAC:26982071 Populus trichocarpa 1058  
Potri.010G019800.2 A0A2K1YMI9 PAC:26982070 Populus trichocarpa 1058  
Potri.010G021400.2 A0A2K1YMK4 PAC:26980531 Populus trichocarpa 1059  
Potri.010G021400.1 PAC:26980529 Populus trichocarpa 1062  
Potri.010G021400.3 A0A2K1YMK7 PAC:26980533 Populus trichocarpa 1058  
Potri.010G021400.4 A0A2K1YMK7 PAC:26980532 Populus trichocarpa 1058  
Potri.010G021400.5 A0A2K1YMK4 PAC:26980530 Populus trichocarpa 1059  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15207721
            16298340