Protein Domain : IPR029053

Type:  Domain Name:  Viral coat protein subunit
Description:  The domain that participates in the formation of icosahedral virus shell exhibits a fold with two flanking twisted beta-sheets, each consisting of 4 antiparallel beta-strands, that is called the 8-stranded jelly roll beta-barrel motif [, ]. In the Norwalk virus, a human calicivirus, the capsid protein has a protruding (P) domain connected by a flexible hinge to a shell (S) domain that has this classical eight-stranded beta-sandwich motif []. Short Name:  Viral_coat
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3 Child Features

DB identifier Type Name
IPR000574 Domain Tymovirus coat protein
IPR001676 Domain Picornavirus capsid
IPR004005 Domain Calicivirus coat protein/non-structural polyprotein

0 Contains

1 Cross References

Identifier
G3DSA:2.60.120.20

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
418836 D8S6J1 PAC:15409782 Selaginella moellendorffii 156  
446892 D8SV70 PAC:15403278 Selaginella moellendorffii 605  
evm.TU.contig_42488.1 PAC:16431754 Carica papaya 135  
evm.model.supercontig_128.42 PAC:16407467 Carica papaya 98  
evm.model.supercontig_138.9 PAC:16408497 Carica papaya 120  
evm.model.supercontig_150.42 PAC:16409497 Carica papaya 317  
evm.model.supercontig_2939.1 PAC:16416337 Carica papaya 146  
evm.model.supercontig_38.12 PAC:16418845 Carica papaya 109  
evm.model.supercontig_67.66 PAC:16424750 Carica papaya 199  
evm.model.supercontig_7.266 PAC:16425182 Carica papaya 440  
evm.model.supercontig_70.111 PAC:16425280 Carica papaya 737  
evm.model.supercontig_867.1 PAC:16427653 Carica papaya 126  
29737.m001227 B9SBZ1 PAC:16807246 Ricinus communis 676  
29908.m006245 B9RJV6 PAC:16813058 Ricinus communis 422  
55544.m000032 B9TB14 PAC:16828824 Ricinus communis 208  
Cucsa.050940.1 PAC:16954155 Cucumis sativus 1327  
Cucsa.013880.1 PAC:16951611 Cucumis sativus 56  
Cucsa.165550.1 PAC:16966034 Cucumis sativus 171  
Cucsa.260260.1 A0A0A0L5J1 PAC:16973144 Cucumis sativus 771  
orange1.1g041598m A0A067DFR6 PAC:18104777 Citrus sinensis 315  
orange1.1g047471m A0A067F6W2 PAC:18105432 Citrus sinensis 579  
orange1.1g036134m A0A067DR84 PAC:18139742 Citrus sinensis 238  
AT5G01225.1 Q3E9N0 PAC:19672476 Arabidopsis thaliana 134  
Thhalv10009253m V4KXU2 PAC:20185435 Eutrema salsugineum 74  
Thhalv10009796m V4KZF3 PAC:20187873 Eutrema salsugineum 63  
Thhalv10011854m V4KG76 PAC:20185039 Eutrema salsugineum 134  
Thhalv10018691m V4KEN6 PAC:20192688 Eutrema salsugineum 388  
Ciclev10023387m V4TVV3 PAC:20806826 Citrus clementina 238  
Ciclev10017479m V4VZY2 PAC:20815585 Citrus clementina 97  
Lus10014376 PAC:23143726 Linum usitatissimum 216  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10864506
            10514371
            22297509