Protein Domain : IPR006456

Type:  Domain Name:  ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Description:  The homeodomain (HD) is a 60-amino acid DNA-binding domain found in many transcription factors. HD-containing proteins are found indiverse organisms such as humans, Drosophila, nematode worms, and plants, where they play important roles in development. Zinc-finger-homeodomain (ZF-HD) subfamily proteins have only been identified in plants, and likely play plant specific roles. ZF-HD proteins are expressed predominantly orexclusively in floral tissue, indicating a likely regulatory role during floral development []. The ZF-HD class of homeodomain proteins may also beinvolved in the photosynthesis-related mesophyll-specific gene expression of phosphoenolpyruvate carboxylase in C4 species [] and in pathogen signalingand plant defense mechanisms []. These proteins share three domains of high sequence similarity: the homeodomain (II) located at the carboxy-terminus, and two other segments (Iaand Ib) located in the amino-terminal part. These N-terminal domains contain five conserved cysteine residues and at least three conserved histidineresidues whose spacing ressembles zinc-binding domains involved in dimerization of transcription factors. Although the two domains contain atleast eight potential zinc-binding amino-acids, the unique spacing of the conserved cysteine and histidine residues within domain Ib suggests that bothdomains form one rather than two zinc finger structures. The two conserved motifs Ia and Ib constitute a dimerization domain which is sufficient for theformation of homo- and heterodimers []. This entry represents the N-terminal Cysteine/Histidine-rich dimerization domain. The companion ZF-HD homeobox domain is described in . Short Name:  ZF_HD_homeobox_Cys/His_dimer

0 Child Features

0 Contains

4 Cross Referencess

Identifier
PF04770
PD125774
PS51523
TIGR01566

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
38997 D8S3H5 PAC:15419093 Selaginella moellendorffii 72  
111756 D8S9A7 PAC:15412745 Selaginella moellendorffii 51  
38995 D8SD40 PAC:15419090 Selaginella moellendorffii 64  
17503 D8SEU6 PAC:15420747 Selaginella moellendorffii 143  
68508 D8R3P4 PAC:15415081 Selaginella moellendorffii 184  
85536 D8R5F8 PAC:15420710 Selaginella moellendorffii 170  
86048 D8R4V0 PAC:15419851 Selaginella moellendorffii 93  
evm.model.supercontig_1076.1 PAC:16405413 Carica papaya 246  
evm.model.supercontig_140.55 PAC:16408902 Carica papaya 327  
evm.model.supercontig_140.56 PAC:16408903 Carica papaya 91  
evm.model.supercontig_173.5 PAC:16411005 Carica papaya 284  
evm.model.supercontig_2.123 PAC:16412479 Carica papaya 195  
evm.model.supercontig_2.124 PAC:16412480 Carica papaya 185  
evm.model.supercontig_31.37 PAC:16417181 Carica papaya 275  
evm.model.supercontig_55.54 PAC:16422621 Carica papaya 232  
evm.model.supercontig_6.121 PAC:16423289 Carica papaya 327  
evm.model.supercontig_66.17 PAC:16424578 Carica papaya 316  
evm.model.supercontig_786.1 PAC:16426284 Carica papaya 92  
29806.m000981 B9SIQ1 PAC:16809313 Ricinus communis 311  
29813.m001485 B9S8W4 PAC:16809445 Ricinus communis 319  
29908.m006226 B9RJU0 PAC:16813042 Ricinus communis 270  
29983.m003297 B9RW99 PAC:16815062 Ricinus communis 272  
30138.m004081 B9RLZ3 PAC:16819446 Ricinus communis 95  
30170.m014054 B9R7V6 PAC:16821891 Ricinus communis 289  
29634.m002128 B9S6F4 PAC:16804269 Ricinus communis 333  
29680.m001715 B9S7M8 PAC:16805545 Ricinus communis 160  
28154.m000038 B9T8B5 PAC:16800093 Ricinus communis 245  
27895.m000042 B9T6Z4 PAC:16799451 Ricinus communis 98  
27895.m000041 B9T6Z3 PAC:16799450 Ricinus communis 335  
Cucsa.338950.1 PAC:16978815 Cucumis sativus 293  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11289511
            16428600
            17485478