Protein Domain : IPR028564

Type:  Domain Name:  tRNA methyltransferase TRM10-type domain
Description:  This entry represents a domain found in class IV SAM-dependent methyltransferases TRM10-type []. Methyltransferases classified as class IV (SPOUT) are homodimers and methylate only RNA. The common core of the SPOUT fold contains a five-stranded beta sheet, flanked by two layers of alpha helices. The core can be divided into two subdomains, both displaying an alpha/beta architecture: (1) the N-terminal strands exhibit a Rossmanoidal alpha/beta fold while (2) an important part of the C-terminal (~ 30 residues) is tucked back into the structure forming a conserved topological trefoil knot where SAM binding occurs. The active site, located at the interface of the two subunits, isformed by amino acids from both monomers [, ].TRM10-type methyltransferases include tRNA (guanine(9)-N(1))-methyltransferase, tRNA (adenine(9)-N(1))-methyltransferase and RNA (guanine-9-)-methyltransferase domain-containing protein. TRM10 homologues are widely found in eukaryotes and archaea, but not in bacteria. Short Name:  MT_TRM10-typ

0 Child Features

0 Contains

1 Cross References

Identifier
PS51675

0 Found In

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR016009 Domain tRNA methyltransferase TRMD/TRM10-type domain

423 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
80271 D8QWQ5 PAC:15403770 Selaginella moellendorffii 260  
evm.model.supercontig_27.228 PAC:16415610 Carica papaya 351  
29920.m000102 B9T580 PAC:16813634 Ricinus communis 332  
Cucsa.319330.1 A0A0A0LYJ3 PAC:16977230 Cucumis sativus 333  
orange1.1g020292m A0A067GT00 PAC:18112268 Citrus sinensis 328  
AT5G47680.1 Q9FGI9 PAC:19672693 Arabidopsis thaliana 344  
Thhalv10000943m V4KPT2 PAC:20202576 Eutrema salsugineum 351  
Ciclev10015889m V4UAZ8 PAC:20815441 Citrus clementina 331  
Lus10038778 PAC:23150650 Linum usitatissimum 337  
Lus10039081 PAC:23150729 Linum usitatissimum 394  
Potri.016G005500.1 B9IH11 PAC:27011928 Populus trichocarpa 330  
Potri.006G004900.1 A0A2K1ZUT0 PAC:27005022 Populus trichocarpa 328  
Potri.006G004900.2 PAC:27005023 Populus trichocarpa 260  
Gorai.009G184000.1 A0A0D2UPL3 PAC:26761873 Gossypium raimondii 329  
47329 I0YYQ5 PAC:27386943 Coccomyxa subellipsoidea C-169 371  
11492 C1N0U8 PAC:27340139 Micromonas pusilla CCMP1545 134  
7027 C1NA48 PAC:27343977 Micromonas pusilla CCMP1545 160  
183860 PAC:27345094 Micromonas pusilla CCMP1545 791  
70247 C1MWP7 PAC:27340703 Micromonas pusilla CCMP1545 215  
103420 C1FJB6 PAC:27399747 Micromonas sp RCC299 483  
63391 C1EFT0 PAC:27402787 Micromonas sp RCC299 364  
56501 C1DZL1 PAC:27396945 Micromonas sp RCC299 916  
76613 C1ECN4 PAC:27401194 Micromonas sp RCC299 177  
26008 A4S3C6 PAC:27416193 Ostreococcus lucimarinus 315  
92802 A4RY16 PAC:27416822 Ostreococcus lucimarinus 266  
Thecc1EG030392t1 A0A061GGC3 PAC:27438220 Theobroma cacao 323  
Thecc1EG030392t2 A0A061GGC3 PAC:27438221 Theobroma cacao 323  
Migut.M01444.1.p A0A022QI84 PAC:28948300 Mimulus guttatus 414  
Araha.8755s0010.1.p PAC:28850629 Arabidopsis halleri 343  
Cagra.15822s0010.1.p PAC:28916316 Capsella grandiflora 347  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12826405
            17338813
            24081582