Protein Domain : IPR001032

Type:  Family Name:  Leghaemoglobin
Description:  Globins are haem-containing proteins involved in binding and/or transporting oxygen. They belong to a very large and well studied family that is widely distributed in many organisms []. Globins have evolved from a common ancestor and can be divided into three groups: single-domain globins, and two types of chimeric globins, flavohaemoglobins and globin-coupled sensors. Bacteria have all three types of globins, while archaea lack flavohaemoglobins, and eukaryotes lack globin-coupled sensors []. Several functionally different haemoglobins can coexist in the same species. The major types of globins include:Haemoglobin (Hb): tetramer of two alpha and two beta chains, although embryonic and foetal forms can substitute the alpha or beta chain for ones with higher oxygen affinity, such as gamma, delta, epsilon or zeta chains. Hb transports oxygen from lungs to other tissues in vertebrates []. Hb proteins are also present in unicellular organisms where they act as enzymes or sensors [].Myoglobin (Mb): monomeric protein responsible for oxygen storage in vertebrate muscle [].Neuroglobin: a myoglobin-like haemprotein expressed in vertebrate brain and retina, where it is involved in neuroprotection from damage due to hypoxia or ischemia []. Neuroglobin belongs to a branch of the globin family that diverged early in evolution. Cytoglobin: an oxygen sensor expressed in multiple tissues. Related to neuroglobin [].Erythrocruorin: highly cooperative extracellular respiratory proteins found in annelids and arthropods that are assembled from as many as 180 subunit into hexagonal bilayers [].Leghaemoglobin (legHb or symbiotic Hb): occurs in the root nodules of leguminous plants, where it facilitates the diffusion of oxygen to symbiotic bacteriods in order to promote nitrogen fixation.Non-symbiotic haemoglobin (NsHb): occurs in non-leguminous plants, and can be over-expressed in stressed plants [].Flavohaemoglobins (FHb): chimeric, with an N-terminal globin domain and a C-terminal ferredoxin reductase-like NAD/FAD-binding domain. FHb provides protection against nitric oxide via its C-terminal domain, which transfers electrons to haem in the globin [].Globin-coupled sensors: chimeric, with an N-terminal myoglobin-like domain and a C-terminal domain that resembles the cytoplasmic signalling domain of bacterial chemoreceptors. They bind oxygen, and act to initiate an aerotactic response or regulate gene expression [, ]. Protoglobin: a single domain globin found in archaea that is related to the N-terminal domain of globin-coupled sensors [].Truncated 2/2 globin: lack the first helix, giving them a 2-over-2 instead of the canonical 3-over-3 alpha-helical sandwich fold. Can be divided into three main groups (I, II and II) based on structural features [].Leghaemoglobins are haem-proteins, first identified in root nodules of leguminous plants, where they are crucial for supplying sufficient oxygen to root nodule bacteria for nitrogen fixation to occur [, ]. Although leghaemoglobin and myoglobin both share a common fold, and both regulate the facilitated diffusion of oxygen, leghemoglobins regulate oxygen affinity through a mechanism different from that of myoglobin using a novel combination of haem pocket amino acids that lower the oxygen affinity [, ]. The structure of leghaemoglobins is similar to that of haemoglobins and myoglobins, although there is little sequence conservation []. The protein is largely alpha-helical, eight helices providing the scaffold for a well-defined haem-binding pocket []. By contrast with the tetrameric mammalian globin assembly, the plant form is monomeric []. The structural similarity of leghaemoglobins and haemoglobins has suggested a common evolutionary origin. It was thought that haemoglobins may be found in plants other than legumes [], and indeed globins have now been identified in the roots of non-leguminous plants, where they have a role in respiratory metabolism in the root cells []. This entry also represents Non-symbiotic haemoglobins (NsHb) which play important roles in a variety of cellular processes. A class I NsHb from cotton plants can be induced in plant roots as a defence mechanism against pathogen invasions, possibly by modulating nitric oxide (NO) levels []. Several NsHbs appear to play a role NO scavenging in plants, indicating that the primordial function of haemoglobins may well be to protect against nitrosative stress and to modulate NO signalling functions []. Short Name:  Leghaemoglobin

0 Child Features

1 Contains

DB identifier Type Name
IPR019824 Binding_site Leghaemoglobin, iron-binding site

1 Cross References

Identifier
PR00188

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0019825 IPR001032
GO:0020037 IPR001032

2 Ontology Annotations

GO Term Gene Name
GO:0019825 IPR001032
GO:0020037 IPR001032

0 Parent Features

560 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
80203 D8QX12 PAC:15403656 Selaginella moellendorffii 190  
evm.model.supercontig_62.96 PAC:16424063 Carica papaya 160  
29851.m002460 B9RZD8 PAC:16811486 Ricinus communis 537  
29851.m002461 B9RZD9 PAC:16811487 Ricinus communis 229  
Cucsa.109820.1 A0A0A0LLW6 PAC:16959938 Cucumis sativus 159  
Cucsa.109820.3 PAC:16959940 Cucumis sativus 136  
Cucsa.109820.2 PAC:16959939 Cucumis sativus 148  
Cucsa.308830.1 A0A0A0KTH6 PAC:16976416 Cucumis sativus 151  
orange1.1g037487m A0A067EN61 PAC:18110390 Citrus sinensis 151  
AT3G10520.1 O24521 PAC:19662277 Arabidopsis thaliana 158  
AT2G16060.1 O24520 PAC:19639091 Arabidopsis thaliana 160  
Thhalv10022889m V4NVR8 PAC:20201864 Eutrema salsugineum 160  
Thhalv10021685m V4LEY7 PAC:20181623 Eutrema salsugineum 158  
Ciclev10029240m V4SH90 PAC:20812600 Citrus clementina 222  
Ciclev10029451m V4S7H7 PAC:20812956 Citrus clementina 161  
Lus10005467 PAC:23174346 Linum usitatissimum 152  
Lus10038655 PAC:23143019 Linum usitatissimum 121  
Lus10037926 PAC:23163794 Linum usitatissimum 161  
Potri.009G110800.1 A0A2K1Z647 PAC:26987377 Populus trichocarpa 189  
Potri.009G110800.2 PAC:26987378 Populus trichocarpa 116  
Potri.009G110900.1 PAC:26985754 Populus trichocarpa 174  
Gorai.002G144000.1 A0A0D2R605 PAC:26793212 Gossypium raimondii 159  
Gorai.002G144000.4 A0A0D2NN23 PAC:26793214 Gossypium raimondii 117  
Gorai.002G144000.2 A0A0D2R605 PAC:26793211 Gossypium raimondii 159  
Gorai.002G144000.3 A0A0D2Q6B0 PAC:26793213 Gossypium raimondii 120  
Gorai.012G163700.1 PAC:26828925 Gossypium raimondii 163  
Gorai.012G163500.1 PAC:26827594 Gossypium raimondii 163  
49967 C1MGW9 PAC:27345018 Micromonas pusilla CCMP1545 919  
84803 C1EC08 PAC:27401381 Micromonas sp RCC299 149  
Thecc1EG006314t1 A0A061DWR2 PAC:27460462 Theobroma cacao 163  

21 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15096613
            12962627
            16600051
            17540514
            11092893
            11481493
            15598488
            16888280
            15598493
            15339940
            17084861
            17540516
            17701548
            15804833
            2448639
            1118009
            15797009
            12927972
            11835502
            6854938
            16377734