Protein Domain : IPR007216

Type:  Family Name:  Rcd1/Caf40
Description:  This entry includes Rcd1 and its homologue in budding yeast, Caf40. Mammalian Rcd1 is a component of the CCR4-NOT complex which is one of the major cellular mRNA deadenylases and is linked to various cellular processes including bulk mRNA degradation, miRNA-mediated repression, translational repression during translational initiation and general transcription regulation [].Caf40 is a component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover []. Short Name:  Rcd1/Caf40
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0 Child Features

0 Contains

1 Cross References

Identifier
PTHR12262

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0006402 IPR007216
GO:0030014 IPR007216

2 Ontology Annotations

GO Term Gene Name
GO:0006402 IPR007216
GO:0030014 IPR007216

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
174818 D8RW77 PAC:15420694 Selaginella moellendorffii 305  
evm.model.supercontig_572.3 PAC:16422926 Carica papaya 312  
evm.model.supercontig_84.105 PAC:16427266 Carica papaya 287  
29762.m000488 B9STZ0 PAC:16808136 Ricinus communis 328  
29901.m000409 B9STK9 PAC:16812513 Ricinus communis 341  
29901.m000412 B9STL2 PAC:16812516 Ricinus communis 119  
Cucsa.151180.1 A0A0A0K791 PAC:16964425 Cucumis sativus 319  
Cucsa.151180.2 A0A0A0K791 PAC:16964426 Cucumis sativus 319  
Cucsa.151180.3 A0A0A0K791 PAC:16964427 Cucumis sativus 319  
Cucsa.151180.4 A0A0A0K791 PAC:16964428 Cucumis sativus 319  
Cucsa.148700.1 PAC:16964182 Cucumis sativus 250  
orange1.1g037700m A0A067DFV1 PAC:18098115 Citrus sinensis 309  
orange1.1g042013m A0A067F408 PAC:18100053 Citrus sinensis 321  
AT5G12980.1 Q9LXU1 PAC:19667474 Arabidopsis thaliana 311  
AT3G20800.1 Q8RWV5 PAC:19661189 Arabidopsis thaliana 316  
AT2G32550.1 Q58FZ9 PAC:19638847 Arabidopsis thaliana 322  
Thhalv10021160m V4NMX0 PAC:20183721 Eutrema salsugineum 316  
Thhalv10014186m V4N6M1 PAC:20204164 Eutrema salsugineum 307  
Ciclev10010530m V4UHV1 PAC:20794770 Citrus clementina 321  
Ciclev10017581m V4U4J0 PAC:20816496 Citrus clementina 261  
Lus10009728 PAC:23173069 Linum usitatissimum 341  
Lus10031542 PAC:23155870 Linum usitatissimum 346  
Lus10015136 PAC:23149553 Linum usitatissimum 385  
Potri.014G155500.1 PAC:27035295 Populus trichocarpa 316  
Potri.001G359300.6 PAC:27045615 Populus trichocarpa 254  
Potri.001G359300.4 PAC:27045614 Populus trichocarpa 290  
Potri.001G359300.2 B9GJH1 PAC:27045611 Populus trichocarpa 323  
Potri.001G359300.1 PAC:27045610 Populus trichocarpa 323  
Potri.001G359300.3 A0A2K2C954 PAC:27045612 Populus trichocarpa 323  
Potri.001G359300.5 PAC:27045613 Populus trichocarpa 292  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11733989
            18180299