Protein Domain : IPR008395

Type:  Domain Name:  Agenet-like domain
Description:  Fragile X Mental Retardation Protein (FMRP), and its autosomal paralogues, Fragile X mental Retardation syndrome-related protein 1 and 2 (FXR1 and FXR2),comprise a family of RNA-binding proteins. It is thought that the FRMP family of proteins contributes to the regulation of protein synthesis at sites wheremRNAs are locally translated in response to stimuli. These proteins are highly similar to one another and also retain highly conserved domain architecture.The two ribonucleoprotein K homology (KH) domains and the cluster of arginine and glycine residues that constitute the RGG box, comprisea large region that is important for RNA binding and polyribosome association. In addition, two Agenet-like domains exist in tandem within the N-terminalregions of FMRP family proteins. The Agenet-like domain belongs to the "Royal" domain superfamilly which contains also the Tudor, chromo, MBT, PWWP and plantAgenet domains. Biochemical analysis of the tandem Agenet-like domains reveals their ability to preferentially recognise trimethylated peptides in asequence-specific manner [, , , ].The Agenet-like domain folds into a bent four-stranded antiparallel beta sheet with a fifth strand closing the cavity of the sheet, similar to a thumbacross a semiclosed hand [, ]. Short Name:  Agenet-like_dom

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF05641
PS51641

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
415212 D8RVD7 PAC:15418722 Selaginella moellendorffii 1216  
415282 D8RVL5 PAC:15418901 Selaginella moellendorffii 688  
444321 D8S8Z0 PAC:15415883 Selaginella moellendorffii 514  
85351 D8R580 PAC:15419236 Selaginella moellendorffii 161  
evm.TU.contig_31482.1 PAC:16429992 Carica papaya 499  
evm.TU.contig_34571.1 PAC:16430472 Carica papaya 138  
evm.TU.contig_43820.1 PAC:16431925 Carica papaya 120  
evm.TU.contig_45528.1 PAC:16432190 Carica papaya 138  
evm.model.supercontig_18.95 PAC:16411486 Carica papaya 167  
evm.model.supercontig_29.172 PAC:16416202 Carica papaya 1693  
evm.model.supercontig_427.1 PAC:16419892 Carica papaya 391  
evm.model.supercontig_48.181 PAC:16420819 Carica papaya 333  
evm.model.supercontig_52.170 PAC:16422032 Carica papaya 87  
evm.model.supercontig_52.173 PAC:16422035 Carica papaya 144  
evm.model.supercontig_52.172 PAC:16422034 Carica papaya 125  
evm.model.supercontig_52.171 PAC:16422033 Carica papaya 140  
evm.model.supercontig_551.3 PAC:16422676 Carica papaya 158  
evm.model.supercontig_551.1 PAC:16422674 Carica papaya 88  
evm.model.supercontig_551.2 PAC:16422675 Carica papaya 63  
evm.model.supercontig_693.2 PAC:16424976 Carica papaya 125  
evm.model.supercontig_693.1 PAC:16424975 Carica papaya 166  
evm.model.supercontig_75.67 PAC:16425908 Carica papaya 383  
29841.m002795 B9RV04 PAC:16810508 Ricinus communis 473  
29883.m001978 B9S4Q9 PAC:16812066 Ricinus communis 383  
29889.m003346 B9RZV5 PAC:16812292 Ricinus communis 524  
29900.m001622 B9S9A9 PAC:16812500 Ricinus communis 267  
29900.m001623 B9S9B0 PAC:16812501 Ricinus communis 165  
30076.m004614 B9RNA3 PAC:16817226 Ricinus communis 547  
30101.m000370 B9SXD0 PAC:16817770 Ricinus communis 2104  
30128.m008542 B9RFY6 PAC:16818132 Ricinus communis 215  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12575993
            16407062
            12950170
            21072162