Protein Domain : IPR001079

Type:  Domain Name:  Galectin, carbohydrate recognition domain
Description:  Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements. Members of the galectins family are found in mammals, birds, amphibians, fish, nematodes, sponges, and some fungi. Galectins are known to carry out intra- and extracellular functions through glycoconjugate-mediated recogntion. From the cytosol they may be secreted by non-classical pathways, but they may also be targeted to the nucleus or specific sub-cytosolic sites. Within the same peptide chain some galectins have a CRD with only a few additional amino acids, whereas others have two CRDs joined by a link peptide, and one (galectin-3) has one CRD joined to a different type of domain [, ].The galectin carbohydrate recognition domain (CRD) is a beta-sandwich of about 135 amino acid. The two sheets are slightly bent with 6 strands forming the concave side and 5 strands forming the convex side. The concave side forms a groove in which carbohydrate is bound, and which is long enough to hold about a linear tetrasaccharide [, ]. Short Name:  Galectin_CRD

0 Child Features

0 Contains

4 Cross Referencess

Identifier
PF00337
PS51304
SM00276
SM00908

3 Found Ins

DB identifier Type Name
IPR015533 Family Galectin-4/6
IPR015534 Family Galectin-3
IPR015535 Family Galectin-1

1 GO Annotation

GO Term Gene Name
GO:0030246 IPR001079

1 Ontology Annotations

GO Term Gene Name
GO:0030246 IPR001079

1 Parent Features

DB identifier Type Name
IPR013320 Domain Concanavalin A-like lectin/glucanase domain

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
174046 PAC:15414753 Selaginella moellendorffii 544  
230337 PAC:15413116 Selaginella moellendorffii 458  
183099 PAC:15419105 Selaginella moellendorffii 527  
evm.model.supercontig_121.25 PAC:16407030 Carica papaya 629  
evm.model.supercontig_146.63 PAC:16409155 Carica papaya 411  
evm.model.supercontig_5.296 PAC:16421413 Carica papaya 677  
29736.m002069 B9S2F1 PAC:16807174 Ricinus communis 638  
29813.m001496 B9S8X5 PAC:16809456 Ricinus communis 631  
29889.m003360 B9RZW9 PAC:16812306 Ricinus communis 661  
30059.m000456 B9SYI3 PAC:16816283 Ricinus communis 683  
30147.m014042 B9R916 PAC:16820056 Ricinus communis 670  
28838.m000256 PAC:16801790 Ricinus communis 612  
Cucsa.048010.1 A0A0A0KKS2 PAC:16953784 Cucumis sativus 681  
Cucsa.048010.2 PAC:16953785 Cucumis sativus 526  
Cucsa.098060.1 A0A0A0LQS4 PAC:16958254 Cucumis sativus 664  
Cucsa.252350.1 PAC:16971931 Cucumis sativus 632  
Cucsa.252350.2 PAC:16971932 Cucumis sativus 632  
Cucsa.285020.1 PAC:16974786 Cucumis sativus 480  
Cucsa.285560.2 PAC:16974865 Cucumis sativus 568  
Cucsa.285560.1 A0A0A0KQG2 PAC:16974864 Cucumis sativus 672  
orange1.1g005540m A0A067G9R6 PAC:18114674 Citrus sinensis 691  
orange1.1g007392m A0A067GJ50 PAC:18114676 Citrus sinensis 605  
orange1.1g006408m A0A067G6Z5 PAC:18114675 Citrus sinensis 646  
orange1.1g006694m A0A067GAN4 PAC:18135435 Citrus sinensis 635  
orange1.1g006036m A0A067G118 PAC:18109777 Citrus sinensis 663  
orange1.1g010749m A0A067FXL1 PAC:18109780 Citrus sinensis 502  
orange1.1g007828m A0A067G9K5 PAC:18109778 Citrus sinensis 588  
orange1.1g008190m A0A067G985 PAC:18109779 Citrus sinensis 574  
orange1.1g009630m A0A067G2D9 PAC:18132320 Citrus sinensis 530  
orange1.1g006860m A0A067GTG7 PAC:18102433 Citrus sinensis 628  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8262940
            8747464
            16051274
            14758066