Protein Domain : IPR021726

Type:  Domain Name:  THO complex, subunitTHOC2, N-terminal
Description:  The THO/TREX complex is the transcription- and export-related complex associated with spliceosomes that preferentially deal with spliced mRNAs as opposed to unspliced mRNAs. Thoc2 plays a role in RNA polymerase II (RNA pol II)-dependent transcription and is required for the stability of DNA repeats []. In humans, the TRE complex is comprised of the exon-junction-associated proteins Aly/REF and UAP56 together with the THO proteins THOC1 (hHpr1/p84), Thoc2 (hRlr1), THOC3 (hTex1), THOC5 (fSAP79), THOC6 (fSAP35), and THOC7 (fSAP24). Although much evidence indicates that the function of the TREX complex as an adaptor between the mRNA and components of the export machinery is conserved among eukaryotes, in Drosophila the majority of mRNAs can be exported from the nucleus independently of the THO complex []. This entry represents a conserved domain found towards the N terminus of these proteins. Short Name:  THO_THOC2_N

0 Child Features

0 Contains

1 Cross References

Identifier
PF11732

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

868 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
173562 D8RRI3 PAC:15415662 Selaginella moellendorffii 1717  
evm.model.supercontig_2.149 PAC:16412507 Carica papaya 448  
29968.m000648 B9SNG7 PAC:16814632 Ricinus communis 1828  
Cucsa.012040.1 A0A0A0KPA6 PAC:16951496 Cucumis sativus 1887  
orange1.1g000195m A0A067F0F8 PAC:18095067 Citrus sinensis 1874  
orange1.1g000206m A0A067FCA9 PAC:18095068 Citrus sinensis 1860  
orange1.1g000250m A0A067F0B6 PAC:18095070 Citrus sinensis 1785  
orange1.1g000218m A0A067FBI5 PAC:18095069 Citrus sinensis 1847  
AT1G24706.2 F4IAT2 PAC:19650127 Arabidopsis thaliana 1823  
AT1G24706.1 F4IAT3 PAC:19650128 Arabidopsis thaliana 1804  
Thhalv10006540m PAC:20186564 Eutrema salsugineum 1767  
Thhalv10006575m PAC:20186565 Eutrema salsugineum 1323  
Ciclev10017843m V4UB31 PAC:20817497 Citrus clementina 634  
Lus10031945 PAC:23161100 Linum usitatissimum 1867  
Lus10035106 PAC:23162395 Linum usitatissimum 1874  
Potri.013G085000.3 PAC:26995791 Populus trichocarpa 1855  
Potri.013G085000.2 PAC:26995792 Populus trichocarpa 1805  
Potri.013G085000.1 A0A2K1Y314 PAC:26995790 Populus trichocarpa 1882  
Potri.019G054600.4 PAC:27026459 Populus trichocarpa 683  
Potri.019G054600.1 PAC:27026453 Populus trichocarpa 1890  
Potri.019G054600.3 PAC:27026454 Populus trichocarpa 1882  
Potri.019G054600.5 PAC:27026458 Populus trichocarpa 716  
Potri.019G054600.2 PAC:27026455 Populus trichocarpa 1836  
Gorai.005G152800.2 A0A0D2SHJ8 PAC:26806470 Gossypium raimondii 1844  
Gorai.005G152800.4 A0A0D2SHJ8 PAC:26806471 Gossypium raimondii 1844  
Gorai.005G152800.1 A0A0D2PTK2 PAC:26806469 Gossypium raimondii 1853  
Gorai.005G152800.7 A0A0D2ND95 PAC:26806475 Gossypium raimondii 1450  
Gorai.005G152800.3 A0A0D2PTJ8 PAC:26806472 Gossypium raimondii 1831  
Gorai.005G152800.5 A0A0D2PTJ8 PAC:26806473 Gossypium raimondii 1831  
Gorai.005G152800.6 A0A0D2RFN7 PAC:26806474 Gossypium raimondii 1817  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9707445
            17095540