Protein Domain : IPR007319

Type:  Domain Name:  Small-subunit processome, Utp21
Description:  A large ribonuclear protein complex is required for the processing of the small-ribosomal-subunit rRNA - the small-subunit (SSU) processome [, ]. This preribosomal complex contains the U3 snoRNA and at least 40 proteins, which have the following properties: They are nucleolar.They are able to coimmunoprecipitate with the U3 snoRNA and Mpp10 (a protein specific to the SSU processome). They are required for 18S rRNA biogenesis.There appears to be a linkage between polymerase I transcription and the formation of the SSU processome; as some, but not all, of the SSU processome components are required for pre-rRNA transcription initiation. These SSU processome components have been termed t-Utps. They form a pre-complex with pre-18S rRNA in the absence of snoRNA U3 and other SSU processome components. It has been proposed that the t-Utp complex proteins are both rDNA and rRNA binding proteins that are involved in the initiation of pre18S rRNA transcription. Initially binding to rDNA then associating with the 5' end of the nascent pre18S rRNA. The t-Utpcomplex forms the nucleus around which the rest of the SSU processome components, including snoRNA U3, assemble []. From electron microscopy the SSU processome may correspond to the terminal knobs visualized at the 5' ends of nascent 18S rRNA. Utp21 is a component of the SSU processome, which is required for pre-18S rRNA processing. It interacts with Utp18 []. Short Name:  SSU_processome_Utp21

0 Child Features

0 Contains

1 Cross References

Identifier
PF04192

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0006364 IPR007319
GO:0032040 IPR007319

2 Ontology Annotations

GO Term Gene Name
GO:0006364 IPR007319
GO:0032040 IPR007319

0 Parent Features

434 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
78691 D8QUF4 PAC:15423096 Selaginella moellendorffii 900  
evm.model.supercontig_74.40 PAC:16425731 Carica papaya 386  
29191.m000028 B9T842 PAC:16802439 Ricinus communis 906  
Cucsa.179020.1 A0A0A0LGY1 PAC:16967188 Cucumis sativus 891  
orange1.1g003579m PAC:18105293 Citrus sinensis 809  
orange1.1g002564m PAC:18105292 Citrus sinensis 907  
orange1.1g004270m PAC:18105294 Citrus sinensis 764  
orange1.1g005656m PAC:18105295 Citrus sinensis 685  
AT4G04940.1 Q93YS7 PAC:19645736 Arabidopsis thaliana 910  
Thhalv10028405m V4L394 PAC:20197525 Eutrema salsugineum 910  
Thhalv10028439m V4LEB9 PAC:20197526 Eutrema salsugineum 796  
Ciclev10007395m V4U0Q3 PAC:20792882 Citrus clementina 907  
Lus10035842 PAC:23147605 Linum usitatissimum 903  
Lus10036625 PAC:23174661 Linum usitatissimum 915  
Potri.006G078900.1 B9HBB5 PAC:27007850 Populus trichocarpa 910  
Potri.018G148100.1 PAC:27011382 Populus trichocarpa 880  
Gorai.004G022700.1 A0A0D2P5H5 PAC:26774944 Gossypium raimondii 903  
Gorai.004G022700.2 A0A0D2QQE8 PAC:26774945 Gossypium raimondii 901  
16904 I0YU81 PAC:27391950 Coccomyxa subellipsoidea C-169 904  
53769 C1N7N5 PAC:27343391 Micromonas pusilla CCMP1545 1238  
98006 C1FHS3 PAC:27397622 Micromonas sp RCC299 891  
37792 A4S8U7 PAC:27415920 Ostreococcus lucimarinus 934  
Thecc1EG038748t1 A0A061GX92 PAC:27425763 Theobroma cacao 906  
Migut.N01789.1.p A0A022RTG2 PAC:28925811 Mimulus guttatus 911  
Migut.O00915.1.p A0A022QHZ1 PAC:28929978 Mimulus guttatus 499  
Araha.1742s0008.1.p PAC:28858909 Arabidopsis halleri 911  
Cagra.5070s0010.1.p PAC:28901589 Capsella grandiflora 641  
Glyma.08G359600.1.p I1KZF2 PAC:30535996 Glycine max 907  
Glyma.01G001600.1.p I1J4A5 PAC:30543670 Glycine max 906  
Glyma.01G001600.2.p A0A0R0L9V4 PAC:30543671 Glycine max 904  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12068309
            15590835
            15489292