Protein Domain : IPR001734

Type:  Family Name:  Sodium/solute symporter
Description:  Sodium/substrate symport (or co-transport) is a widespread mechanism of solute transport across cytoplasmic membranes of pro- and eukaryotic cells. Thereby the energy stored in an inwardly directed electrochemical sodium gradient (sodium motive force, SMF) is used to drive solute accumulation against a concentrationgradient. The SMF is generated by primary sodium pumps (e.g. sodium/potassium ATPases, sodium translocating respiratory chain complexes) or via the action of sodium/proton antiporters. Sodium/substrate transporters are grouped in different families based on sequence similarities [, ].One of these families, known as the sodium:solute symporter family (SSSF), contains over a hundred members of pro- and eukaryotic origin []. The average hydropathy plot for SSSF proteins predicts 11 to 15 putative transmembrane domains (TMs) in alpha-helical conformation. A secondary structure model of PutP from Escherichia colisuggests the protein contains 13 TMs with the N terminus located on the periplasmic side of the membrane and the C terminus facing the cytoplasm. The results support the idea of a common topological motif for members of the SSSF. Transporters with a C-terminal extension are proposed to havean additional 14th TM. An ordered binding model of sodium/substrate transport suggests that sodium binds to the empty transporter first, thereby inducing a conformational alteration which increases the affinity of the transporter for the solute. The formation of the ternarycomplex induces another structural change that exposes sodium and substrate to the other site of the membrane. Substrate and sodium are released and the empty transporter re-orientates in the membrane allowing the cycle to start again. Short Name:  Na/solute_symporter

2 Child Features

DB identifier Type Name
IPR019900 Family Sodium/solute symporter, subgroup
IPR019899 Family Sodium/solute symporter, VC2705 subfamily

1 Contains

DB identifier Type Name
IPR018212 Conserved_site Sodium/solute symporter, conserved site

3 Cross Referencess

Identifier
PTHR11819
PF00474
PS50283

0 Found In

4 GO Annotations

GO Term Gene Name
GO:0005215 IPR001734
GO:0006810 IPR001734
GO:0055085 IPR001734
GO:0016020 IPR001734

4 Ontology Annotations

GO Term Gene Name
GO:0005215 IPR001734
GO:0006810 IPR001734
GO:0055085 IPR001734
GO:0016020 IPR001734

0 Parent Features

489 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
172808 D8RMV2 PAC:15414922 Selaginella moellendorffii 679  
evm.model.supercontig_90.24 PAC:16428386 Carica papaya 1043  
29827.m002588 B9S1K8 PAC:16810021 Ricinus communis 720  
35220.m000034 B9TG43 PAC:16826523 Ricinus communis 80  
Cucsa.322410.1 A0A0A0L3R6 PAC:16977754 Cucumis sativus 711  
orange1.1g004956m A0A067EGX4 PAC:18119603 Citrus sinensis 722  
AT5G45380.1 F4KD71 PAC:19673122 Arabidopsis thaliana 704  
Thhalv10000803m V4KP51 PAC:20202992 Eutrema salsugineum 702  
Ciclev10000444m V4SYZ4 PAC:20786717 Citrus clementina 707  
Ciclev10000443m V4SYZ4 PAC:20786719 Citrus clementina 707  
Ciclev10000441m V4SYZ4 PAC:20786718 Citrus clementina 707  
Lus10033882 PAC:23172818 Linum usitatissimum 626  
Lus10037255 PAC:23152434 Linum usitatissimum 712  
Lus10003564 PAC:23155667 Linum usitatissimum 508  
Lus10000112 PAC:23177075 Linum usitatissimum 109  
Potri.003G104000.1 B9GZX7 PAC:26998885 Populus trichocarpa 707  
Potri.003G104000.2 PAC:26998886 Populus trichocarpa 705  
Gorai.005G228700.1 A0A0D2SM19 PAC:26803903 Gossypium raimondii 697  
Gorai.005G228700.2 A0A0D2RRR3 PAC:26803904 Gossypium raimondii 620  
49153 I0YJS6 PAC:27387746 Coccomyxa subellipsoidea C-169 721  
53548 I0YXU9 PAC:27392573 Coccomyxa subellipsoidea C-169 674  
57020 I0YRT0 PAC:27386071 Coccomyxa subellipsoidea C-169 705  
37454 I0YRL4 PAC:27386334 Coccomyxa subellipsoidea C-169 639  
48033 I0YUF9 PAC:27391990 Coccomyxa subellipsoidea C-169 674  
30678 I0YQ78 PAC:27394852 Coccomyxa subellipsoidea C-169 699  
64250 I0ZA08 PAC:27389385 Coccomyxa subellipsoidea C-169 558  
39311 I0ZAQ5 PAC:27389516 Coccomyxa subellipsoidea C-169 878  
60112 C1MXD2 PAC:27338971 Micromonas pusilla CCMP1545 588  
48760 C1N5C8 PAC:27340011 Micromonas pusilla CCMP1545 635  
58242 C1E525 PAC:27400267 Micromonas sp RCC299 713  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8031825
            1965458
            12354616