Protein Domain : IPR007644

Type:  Domain Name:  RNA polymerase, beta subunit, protrusion
Description:  RNA polymerases catalyse the DNA dependent polymerisation of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial and chloroplast polymerases). This domain forms one of the two distinctive lobes of the Rpb2 structure. This domain is also known as the protrusion domain []. The other lobe, RNA polymerase Rpb2, domain 2, is nested within this domain. Short Name:  RNA_pol_bsu_protrusion
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0 Child Features

1 Contains

DB identifier Type Name
IPR007642 Domain RNA polymerase Rpb2, domain 2

1 Cross References

Identifier
PF04563

1 Found In

DB identifier Type Name
IPR010243 Family DNA-directed RNA polymerase, beta subunit

3 GO Annotations

GO Term Gene Name
GO:0003677 IPR007644
GO:0003899 IPR007644
GO:0006351 IPR007644

3 Ontology Annotations

GO Term Gene Name
GO:0003677 IPR007644
GO:0003899 IPR007644
GO:0006351 IPR007644

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
148107 D8RLN5 PAC:15405344 Selaginella moellendorffii 1178  
405033 D8QY62 PAC:15410045 Selaginella moellendorffii 1126  
443461 D8S1N7 PAC:15413877 Selaginella moellendorffii 1386  
evm.model.supercontig_127.33 PAC:16407396 Carica papaya 1117  
evm.model.supercontig_169.38 PAC:16410560 Carica papaya 366  
evm.model.supercontig_17.37 PAC:16410758 Carica papaya 209  
evm.model.supercontig_27.44 PAC:16415664 Carica papaya 1049  
29848.m004540 B9RNV9 PAC:16811196 Ricinus communis 1203  
29851.m002412 B9RZ91 PAC:16811439 Ricinus communis 1194  
30040.m000275 B9SVH7 PAC:16816021 Ricinus communis 1159  
29686.m000857 B9SHS2 PAC:16805768 Ricinus communis 1139  
Cucsa.046200.1 PAC:16953485 Cucumis sativus 1199  
Cucsa.005050.1 PAC:16951065 Cucumis sativus 1173  
Cucsa.271520.1 A0A0A0L319 PAC:16973540 Cucumis sativus 1197  
Cucsa.361180.1 PAC:16980869 Cucumis sativus 1163  
orange1.1g046830m A0A067G8P1 PAC:18114603 Citrus sinensis 518  
orange1.1g001050m A0A067EB52 PAC:18098268 Citrus sinensis 1173  
orange1.1g001125m PAC:18129243 Citrus sinensis 1149  
orange1.1g001532m PAC:18129244 Citrus sinensis 1058  
orange1.1g001124m PAC:18129242 Citrus sinensis 1149  
orange1.1g001092m PAC:18129241 Citrus sinensis 1159  
orange1.1g001943m PAC:18129245 Citrus sinensis 993  
orange1.1g001021m A0A067DRM8 PAC:18124521 Citrus sinensis 1186  
orange1.1g000996m A0A067E023 PAC:18124520 Citrus sinensis 1195  
orange1.1g003180m A0A067DYZ5 PAC:18124522 Citrus sinensis 842  
orange1.1g002545m PAC:18126674 Citrus sinensis 910  
orange1.1g001179m PAC:18126672 Citrus sinensis 1131  
orange1.1g002296m PAC:18126673 Citrus sinensis 940  
AT4G21710.1 P38420 PAC:19648510 Arabidopsis thaliana 1188  
AT5G45140.1 F4KD38 PAC:19665665 Arabidopsis thaliana 1161  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            3116266