Protein Domain : IPR017071

Type:  Family Name:  Transcription elongation factor Spt5
Description:  This family consists of several eukaryotic transcription elongation Spt5 proteins. These proteins contain two copies of a domain (Supt5; ) that is characteristic of proteins involved in chromatin regulation. An NGN domain separates the Supt5 domains. In yeast Spt5 protein, this domain possesses a RNP-like fold and it is thought to confer affinity for Spt4 protein. Supt5 domains are followed by four to five copies of a KOW domain (), present in many ribosomal proteins.Three transcription-elongation factors Spt4, Spt5, and Spt6 are conserved among eukaryotes and are essential for transcription via modulation of chromatin structure. Spt4 and Spt5 are tightly associated in a complex, while the physical association Spt6 is considerably weaker. It has been demonstrated that Spt4, Spt5, and Spt6 play roles in transcription elongation in both yeast and humans, including a role in activation by Tat. It is known that Spt4, Spt5, and Spt6 are general transcription-elongation factors, controlling transcription both positively and negatively in important regulatory and developmental roles [].This information was partially derived from InterPro (). Short Name:  TF_Spt5

0 Child Features

4 Contains

DB identifier Type Name
IPR022581 Domain Spt5 transcription elongation factor, N-terminal
IPR005824 Domain KOW
IPR006645 Domain NusG, N-terminal
IPR005100 Domain Transcription elongation factor Spt5, NGN domain

1 Cross References

Identifier
PIRSF036945

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0006357 IPR017071
GO:0032784 IPR017071

2 Ontology Annotations

GO Term Gene Name
GO:0006357 IPR017071
GO:0032784 IPR017071

0 Parent Features

603 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
449156 D8TD72 PAC:15406619 Selaginella moellendorffii 931  
96727 D8RM04 PAC:15410061 Selaginella moellendorffii 1003  
evm.model.supercontig_188.8 PAC:16411774 Carica papaya 1039  
27985.m000887 B9SJK4 PAC:16799730 Ricinus communis 1045  
Cucsa.077110.1 PAC:16955900 Cucumis sativus 1041  
orange1.1g001639m A0A067GVD5 PAC:18092338 Citrus sinensis 1039  
orange1.1g001506m A0A067GV45 PAC:18092337 Citrus sinensis 1065  
AT4G08350.1 Q9STN3 PAC:19647724 Arabidopsis thaliana 1041  
AT2G34210.1 O80770 PAC:19638922 Arabidopsis thaliana 989  
Thhalv10028382m V4L527 PAC:20197245 Eutrema salsugineum 1034  
Ciclev10000121m V4SIR3 PAC:20785381 Citrus clementina 1039  
Lus10028630 PAC:23164480 Linum usitatissimum 1037  
Lus10018928 PAC:23144664 Linum usitatissimum 1037  
Potri.009G124200.1 PAC:26987938 Populus trichocarpa 1048  
Potri.009G124200.2 PAC:26987940 Populus trichocarpa 1042  
Potri.009G124200.3 PAC:26987939 Populus trichocarpa 1047  
Potri.009G124200.4 PAC:26987941 Populus trichocarpa 1006  
Potri.004G162500.1 B9H0X9 PAC:26992390 Populus trichocarpa 1051  
Gorai.009G284500.3 A0A0D2TWP9 PAC:26762641 Gossypium raimondii 900  
Gorai.009G284500.1 A0A0D2UVD1 PAC:26762639 Gossypium raimondii 1046  
Gorai.009G284500.2 A0A0D2TT00 PAC:26762640 Gossypium raimondii 1045  
56915 I0YRH3 PAC:27386057 Coccomyxa subellipsoidea C-169 1114  
87576 A4RZ64 PAC:27418456 Ostreococcus lucimarinus 938  
Thecc1EG001448t1 A0A061DJH1 PAC:27435132 Theobroma cacao 863  
Thecc1EG035426t2 A0A061FI63 PAC:27458977 Theobroma cacao 923  
Thecc1EG035426t1 A0A061FIV9 PAC:27458976 Theobroma cacao 1041  
Migut.C01045.1.p PAC:28944349 Mimulus guttatus 1043  
Migut.C01045.2.p A0A022PPS2 PAC:28944350 Mimulus guttatus 1042  
Araha.20846s0002.1.p PAC:28847899 Arabidopsis halleri 978  
Araha.8763s0001.1.p PAC:28854458 Arabidopsis halleri 955  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11182892