Protein Domain : IPR014038

Type:  Domain Name:  Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
Description:  Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution.Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) [].This entry represents the guanine nucleotide exchange domain of the beta (EF-1beta, also known as EF1B-alpha) and delta (EF-1delta, also known as EF1B-beta) chains of EF1B proteins from eukaryotes and archaea. The beta and delta chains have exchange activity, which mainly resides in their homologous guanine nucleotide exchange domains, found in the C-terminal region of the peptides. Their N-terminal regions may be involved in interactions with the gamma chain (EF-1gamma). Short Name:  Transl_elong_fac_EF1B_bsu/dsu

0 Child Features

1 Contains

DB identifier Type Name
IPR001326 Conserved_site Translation elongation factor EF1B, beta/delta chains, conserved site

3 Cross Referencess

Identifier
PF00736
SM00888
SSF54984

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0003746 IPR014038
GO:0006414 IPR014038
GO:0005853 IPR014038

3 Ontology Annotations

GO Term Gene Name
GO:0003746 IPR014038
GO:0006414 IPR014038
GO:0005853 IPR014038

1 Parent Features

DB identifier Type Name
IPR014717 Domain Translation elongation factor EF1B/ribosomal protein S6

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
94371 D8RIH5 PAC:15423461 Selaginella moellendorffii 219  
evm.model.supercontig_13.135 PAC:16407642 Carica papaya 233  
evm.model.supercontig_34.208 PAC:16417947 Carica papaya 225  
29785.m000934 B9SB41 PAC:16808480 Ricinus communis 226  
30147.m014521 B9RAH5 PAC:16820529 Ricinus communis 232  
Cucsa.325890.1 PAC:16978005 Cucumis sativus 223  
Cucsa.325890.2 PAC:16978006 Cucumis sativus 175  
Cucsa.392030.1 A0A0A0LRI8 PAC:16983009 Cucumis sativus 226  
Cucsa.392030.3 A0A0A0LRI8 PAC:16983011 Cucumis sativus 226  
Cucsa.392030.4 PAC:16983012 Cucumis sativus 189  
Cucsa.392030.2 A0A0A0LRI8 PAC:16983010 Cucumis sativus 226  
orange1.1g035053m A0A067FT88 PAC:18123053 Citrus sinensis 74  
orange1.1g040594m PAC:18127493 Citrus sinensis 286  
orange1.1g038216m A0A067F8V1 PAC:18091136 Citrus sinensis 132  
orange1.1g027235m A0A067EBT2 PAC:18123542 Citrus sinensis 226  
orange1.1g027200m A0A067EP05 PAC:18123543 Citrus sinensis 226  
orange1.1g027203m A0A067EP05 PAC:18123544 Citrus sinensis 226  
orange1.1g027254m A0A067EP05 PAC:18123540 Citrus sinensis 226  
orange1.1g027196m A0A067EBT2 PAC:18123541 Citrus sinensis 226  
AT5G12110.1 Q84WM9 PAC:19671583 Arabidopsis thaliana 228  
AT5G19510.1 Q9SCX3 PAC:19669353 Arabidopsis thaliana 224  
AT1G30230.2 A8MRC4 PAC:19652261 Arabidopsis thaliana 260  
AT1G30230.1 P48006 PAC:19652262 Arabidopsis thaliana 231  
AT2G18110.1 Q9SI20 PAC:19640711 Arabidopsis thaliana 231  
Thhalv10026150m V4MFX4 PAC:20195322 Eutrema salsugineum 229  
Thhalv10014599m V4LE23 PAC:20204236 Eutrema salsugineum 225  
Thhalv10008675m V4KUZ8 PAC:20186662 Eutrema salsugineum 230  
Ciclev10021553m V4TIY6 PAC:20809424 Citrus clementina 282  
Ciclev10027451m V4SQS2 PAC:20802204 Citrus clementina 230  
Ciclev10021530m V4SZQ0 PAC:20809423 Citrus clementina 284  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12932732
            15922593
            12762045