Protein Domain : IPR011256

Type:  Domain Name:  Regulatory factor, effector binding domain
Description:  The effector domain is found in bacterial regulatory proteins, such as transcription factors. The effector domain consists of a duplication of a beta/alpha/beta(2) motif, where the antiparallel beta sheets form a barrel structure. Several proteins contain this domain, such as the multidrug-binding domain of the transcription factor BmrR, which transcriptionally regulates multidrug transporters as well as acting as a multidrug-binding protein [], the C-terminal domain of the Rob transcription factor, which belongs to the AraC/XylS protein family that regulate genes involved in resistace to antibiotics, organic solvents and heavy metals [], and the gyrase inhibitory protein GyrI (SbmC, TeeB), which is induced by DNA damaging agents to suppress cell proliferation by inhibiting bacterial gyrase activity []. Short Name:  Reg_factor_effector_dom

1 Child Features

DB identifier Type Name
IPR010499 Domain Bacterial transcription activator, effector binding

0 Contains

2 Cross Referencess

Identifier
G3DSA:3.20.80.10
SSF55136

1 Found In

DB identifier Type Name
IPR008319 Family Uncharacterised conserved protein UCP031644

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
442225 D8RRU7 PAC:15409229 Selaginella moellendorffii 197  
438881 D8R041 PAC:15401976 Selaginella moellendorffii 372  
270508 D8R2V0 PAC:15420933 Selaginella moellendorffii 230  
439222 D8R2U7 PAC:15422412 Selaginella moellendorffii 818  
410255 D8RE54 PAC:15404079 Selaginella moellendorffii 150  
evm.model.supercontig_153.7 PAC:16409696 Carica papaya 111  
evm.model.supercontig_5.16 PAC:16421262 Carica papaya 305  
evm.model.supercontig_52.138 PAC:16421996 Carica papaya 174  
evm.model.supercontig_56.92 PAC:16422805 Carica papaya 202  
evm.model.supercontig_69.91 PAC:16424966 Carica papaya 206  
evm.model.supercontig_75.80 PAC:16425923 Carica papaya 385  
evm.model.supercontig_77.85 PAC:16426146 Carica papaya 225  
29759.m000279 B9SVW3 PAC:16808079 Ricinus communis 234  
29807.m000492 B9STP5 PAC:16809335 Ricinus communis 381  
30147.m013911 B9RAY6 PAC:16819926 Ricinus communis 230  
43540.m000047 B9T9S6 PAC:16827610 Ricinus communis 111  
29625.m000719 B9SRY6 PAC:16803870 Ricinus communis 297  
27504.m000618 B9SPI4 PAC:16798528 Ricinus communis 210  
28492.m000468 B9SV14 PAC:16800948 Ricinus communis 67  
27798.m000602 B9SPG1 PAC:16799218 Ricinus communis 201  
Cucsa.363790.1 PAC:16981151 Cucumis sativus 198  
Cucsa.176010.1 A0A0A0LFF2 PAC:16966835 Cucumis sativus 198  
Cucsa.291290.1 A0A0A0KVD6 PAC:16975222 Cucumis sativus 220  
Cucsa.241160.1 A0A0A0LAW9 PAC:16970993 Cucumis sativus 305  
Cucsa.286310.1 A0A0A0KVJ5 PAC:16974997 Cucumis sativus 208  
Cucsa.327400.1 A0A0A0LWP3 PAC:16978072 Cucumis sativus 387  
Cucsa.327420.1 PAC:16978074 Cucumis sativus 340  
orange1.1g046324m A0A067D5L3 PAC:18093005 Citrus sinensis 119  
orange1.1g044290m A0A067DAI2 PAC:18106321 Citrus sinensis 80  
orange1.1g027241m A0A067FSU2 PAC:18117932 Citrus sinensis 226  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            10802742
            12180910
            11948793