Protein Domain : IPR001998

Type:  Family Name:  Xylose isomerase
Description:  Xylose isomerase () [] is an enzyme found in microorganisms which catalyzes the interconversion of D-xylose to D-xylulose. It can also isomerize D-ribose to D-ribulose and D-glucose to D-fructose. The enzyme is a homotetramer, which is stabilised by cobalt, and requires magnesium for its catalytic activity. Each subunit contains 2 domains: the core domain is a parallel alpha-beta barrel; the C-terminal domain is a loop structure consisting of 5 helices and is involved in intermolecular contacts between adjacent subunits []. The active site lies in a deep pocket near the C-terminal ends of the strands of the barrel domain and includes residues from a second subunit. The tetramer is effectively a dimer of "active" dimers, the active sites being composed of residues from both subunits [].Xylose isomerase also exists in plants [] where it is homodimeric and is manganese-dependent. Short Name:  Xylose_isomerase

2 Child Features

DB identifier Type Name
IPR013452 Family Xylose isomerase, bacterial-type
IPR013453 Family Xylose isomerase, actinobacteria

0 Contains

3 Cross Referencess

Identifier
PR00688
PS51415
MF_00455

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0009045 IPR001998
GO:0005975 IPR001998

2 Ontology Annotations

GO Term Gene Name
GO:0009045 IPR001998
GO:0005975 IPR001998

0 Parent Features

597 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
27859 D8TAQ7 PAC:15407941 Selaginella moellendorffii 105  
161472 D8T6H4 PAC:15401804 Selaginella moellendorffii 478  
evm.model.supercontig_75.2 PAC:16425856 Carica papaya 476  
evm.model.supercontig_95.75 PAC:16428919 Carica papaya 479  
27766.m000154 B9T2E0 PAC:16799138 Ricinus communis 477  
Cucsa.089630.7 A0A0A0LK73 PAC:16957183 Cucumis sativus 476  
Cucsa.089630.16 PAC:16957175 Cucumis sativus 468  
Cucsa.089630.17 PAC:16957176 Cucumis sativus 405  
Cucsa.089630.18 PAC:16957177 Cucumis sativus 398  
Cucsa.089630.11 A0A0A0LK73 PAC:16957170 Cucumis sativus 476  
Cucsa.089630.12 A0A0A0LK73 PAC:16957171 Cucumis sativus 476  
Cucsa.089630.1 A0A0A0LK73 PAC:16957168 Cucumis sativus 476  
orange1.1g037393m PAC:18104171 Citrus sinensis 503  
AT5G57655.1 F4KC24 PAC:19670135 Arabidopsis thaliana 287  
AT5G57655.2 Q9FKK7 PAC:19670134 Arabidopsis thaliana 477  
Thhalv10013406m V4NA18 PAC:20205553 Eutrema salsugineum 482  
Ciclev10008154m V4U1K1 PAC:20795200 Citrus clementina 478  
Lus10001321 PAC:23169293 Linum usitatissimum 480  
Lus10006983 PAC:23165429 Linum usitatissimum 463  
Potri.T093900.5 B9IM30 PAC:27003437 Populus trichocarpa 477  
Potri.T093900.3 PAC:27003440 Populus trichocarpa 390  
Potri.T093900.2 B9IM30 PAC:27003435 Populus trichocarpa 477  
Potri.T093900.1 PAC:27003434 Populus trichocarpa 483  
Potri.T093900.7 PAC:27003439 Populus trichocarpa 469  
Potri.T093900.6 B9IM30 PAC:27003438 Populus trichocarpa 477  
Potri.T093900.4 B9IM30 PAC:27003436 Populus trichocarpa 477  
Gorai.009G296100.2 A0A0D2SAE5 PAC:26769747 Gossypium raimondii 475  
Gorai.009G296100.4 A0A0D2TTZ0 PAC:26769750 Gossypium raimondii 474  
Gorai.009G296100.5 A0A0D2TX97 PAC:26769751 Gossypium raimondii 465  
Gorai.009G296100.3 A0A0D2UVW2 PAC:26769749 Gossypium raimondii 474  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8620879
            2651156
            2769749