Protein Domain : IPR000489

Type:  Domain Name:  Pterin-binding domain
Description:  The ~250-residue pterin-binding domain has been shown to adopt a (beta/alpha)8 barrel fold, which has the overall shape of a distorted cylinder. It has eight alpha-helices stacked around the outside of an inner cylinder of parallel beta-strands. The pterin ring binds at the bottom of the (beta/alpha;)8 barrel in a polar cup-like region that is relatively solvent exposed and fairly negatively charged. The pterin ring is partially buried within the (beta/alpha)8 barrel. The pterin binding residues are highly conserved and include aspartate and asparagine residues located at the C terminus of the beta-strands of the barrel, which are predicted to form hydrogen bonds with the nitrogen and oxygen atoms of the pterin ring [, , ].Some proteins known to contain a pterin-binding domain are listed below: Prokaryotic and eukaryotic B12-dependent methionine synthase (MetH) (), a large, modular protein that catalyzes the transfer of a methyl group from methyltetrahydrofolate (CH3-H4folate) to Hcy to form methionine, using cobalamin as an intermediate methyl carrier.Prokaryotic and eukaryotic dihydropteroate synthase (DHPS) (). It catalyzes the condensation of para-aminobenzoic acid (pABA) with 7,8- dihydropterin-pyrophosphate (DHPPP), eliminating pyrophosphate to form 7,8- dihydropteroate which is subsequently converted to tetrahydrofolate.Moorella thermoacetica 5-methyltetrahydrofolate corrinoid/iron sulphur protein methyltransferase (MeTr). It transfers the N5-methyl group from CH3-H4folate to a cob(I)amide centre in another protein, the corrinoid iron sulphur protein. Short Name:  Pterin-binding_dom

1 Child Features

DB identifier Type Name
IPR006390 Domain Dihydropteroate synthase

0 Contains

5 Cross Referencess

Identifier
PF00809
PS00792
PS00793
PS50972
G3DSA:3.20.20.20

4 Found Ins

DB identifier Type Name
IPR011822 Family Cobalamin-dependent methionine synthase
IPR016227 Family Dihydropteroate synthase, predicted
IPR016261 Family Folic acid synthesis protein FOL1
IPR017215 Family 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial

1 GO Annotation

GO Term Gene Name
GO:0042558 IPR000489

1 Ontology Annotations

GO Term Gene Name
GO:0042558 IPR000489

1 Parent Features

DB identifier Type Name
IPR011005 Domain Dihydropteroate synthase-like

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
80180 D8QWP2 PAC:15403078 Selaginella moellendorffii 506  
119859 D8SLI0 PAC:15414679 Selaginella moellendorffii 158  
429487 D8T6C3 PAC:15416990 Selaginella moellendorffii 186  
evm.model.supercontig_1.153 PAC:16404070 Carica papaya 533  
evm.model.supercontig_31.78 PAC:16417226 Carica papaya 85  
evm.model.supercontig_40.34 PAC:16419435 Carica papaya 623  
evm.model.supercontig_53.139 PAC:16422202 Carica papaya 100  
29729.m002362 B9S4E5 PAC:16807011 Ricinus communis 487  
34384.m000015 B9TKY6 PAC:16826197 Ricinus communis 321  
Cucsa.164830.2 PAC:16965915 Cucumis sativus 506  
Cucsa.164830.1 PAC:16965914 Cucumis sativus 511  
orange1.1g038230m A0A067FW01 PAC:18121533 Citrus sinensis 480  
orange1.1g034650m A0A067E067 PAC:18116481 Citrus sinensis 88  
orange1.1g034653m A0A067E067 PAC:18116482 Citrus sinensis 88  
orange1.1g016265m A0A067H3Y4 PAC:18101604 Citrus sinensis 392  
orange1.1g016248m A0A067H3Y4 PAC:18101605 Citrus sinensis 392  
orange1.1g023571m A0A067GUQ5 PAC:18101606 Citrus sinensis 280  
orange1.1g023556m A0A067GUQ5 PAC:18101607 Citrus sinensis 280  
AT4G30000.1 Q9SZV3 PAC:19644970 Arabidopsis thaliana 554  
AT4G30000.2 Q9SZV3 PAC:19644969 Arabidopsis thaliana 561  
AT1G69190.1 Q1ENB6 PAC:19654554 Arabidopsis thaliana 484  
Thhalv10024845m V4P448 PAC:20194881 Eutrema salsugineum 547  
Thhalv10026419m V4P8I5 PAC:20194658 Eutrema salsugineum 167  
Thhalv10006240m V4LPP3 PAC:20190308 Eutrema salsugineum 208  
Thhalv10006241m V4NEF9 PAC:20190309 Eutrema salsugineum 206  
Thhalv10019460m V4KET2 PAC:20191341 Eutrema salsugineum 480  
Ciclev10023972m V4T850 PAC:20805969 Citrus clementina 88  
Ciclev10031259m V4TD06 PAC:20805137 Citrus clementina 514  
Ciclev10031261m V4TD06 PAC:20805139 Citrus clementina 514  
Ciclev10031260m V4TD06 PAC:20805138 Citrus clementina 514  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9187658
            10997901
            14752199