Protein Domain : IPR022775

Type:  Domain Name:  AP complex, mu/sigma subunit
Description:  Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. Clathrin coats contain both clathrin and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors []. All AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). Each subunit has a specific function. Adaptin subunits recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal appendage domains. By contrast, GGAs are monomers composed of four domains, which have functions similar to AP subunits: an N-terminal VHS (Vps27p/Hrs/Stam) domain, a GAT (GGA and Tom1) domain, a hinge region, and a C-terminal GAE (gamma-adaptin ear) domain. The GAE domain is similar to the AP gamma-adaptin ear domain, being responsible for the recruitment of accessory proteins that regulate clathrin-mediated endocytosis [].While clathrin mediates endocytic protein transport from ER to Golgi, coatomers (COPI, COPII) primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the small sigma and mu subunits of various adaptins from different AP clathrin adaptor complexes (including AP1, AP2, AP3 and AP4), and the zeta and delta subunits of various coatomer (COP) adaptors. The small sigma subunit of AP proteins have been characterised in several species [, , , ]. The sigma subunit plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The zeta subunit of coatomers (zeta-COP) is required for coatomer binding to Golgi membranes and for coat-vesicle assembly [, ]. Short Name:  AP_mu_sigma_su

0 Child Features

0 Contains

1 Cross References

Identifier
PF01217

0 Found In

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR011012 Domain Longin-like domain

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
172790 D8RMS6 PAC:15414355 Selaginella moellendorffii 507  
79294 D8QW20 PAC:15422945 Selaginella moellendorffii 145  
173172 D8RQL1 PAC:15412601 Selaginella moellendorffii 438  
59248 D8RQE6 PAC:15408497 Selaginella moellendorffii 141  
100915 D8RT50 PAC:15403907 Selaginella moellendorffii 147  
442701 D8RVE6 PAC:15413055 Selaginella moellendorffii 179  
113878 D8SCF2 PAC:15419373 Selaginella moellendorffii 143  
121449 D8SP09 PAC:15417633 Selaginella moellendorffii 161  
123571 D8SSF4 PAC:15401960 Selaginella moellendorffii 101  
446561 D8SSF2 PAC:15423205 Selaginella moellendorffii 164  
271913 D8SVE6 PAC:15404538 Selaginella moellendorffii 142  
91068 D8RD97 PAC:15412518 Selaginella moellendorffii 431  
evm.model.supercontig_128.54 PAC:16407480 Carica papaya 230  
evm.model.supercontig_21.5 PAC:16413561 Carica papaya 451  
evm.model.supercontig_25.74 PAC:16414871 Carica papaya 184  
evm.model.supercontig_26.37 PAC:16415277 Carica papaya 142  
evm.model.supercontig_35.63 PAC:16418184 Carica papaya 334  
evm.model.supercontig_36.99 PAC:16418489 Carica papaya 177  
evm.model.supercontig_523.2 PAC:16422140 Carica papaya 132  
evm.model.supercontig_57.88 PAC:16422914 Carica papaya 126  
evm.model.supercontig_6.113 PAC:16423280 Carica papaya 166  
evm.model.supercontig_69.96 PAC:16424971 Carica papaya 428  
evm.model.supercontig_78.44 PAC:16426221 Carica papaya 143  
29706.m001336 B9S5W1 PAC:16806348 Ricinus communis 186  
29912.m005350 B9RKE4 PAC:16813227 Ricinus communis 143  
30089.m001009 B9RPF5 PAC:16817523 Ricinus communis 153  
30147.m013894 B9RAX0 PAC:16819910 Ricinus communis 428  
30162.m001274 B9RKW9 PAC:16820953 Ricinus communis 161  
30170.m014177 B9R884 PAC:16822011 Ricinus communis 142  
29634.m002147 B9S6H3 PAC:16804288 Ricinus communis 166  

10 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8373805
            8157009
            8276893
            12858162
            14690497
            15261670
            9002613
            14729954
            17041781
            17449236