Protein Domain : IPR001392

Type:  Family Name:  Clathrin adaptor, mu subunit
Description:  Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. These vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transport []. Clathrin coats contain both clathrin (acts as a scaffold) and adaptor complexes that link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. The two major types of clathrin adaptor complexes are the heterotetrameric adaptor protein (AP) complexes, and the monomeric GGA (Golgi-localising, Gamma-adaptin ear domain homology, ARF-binding proteins) adaptors [, ].AP (adaptor protein) complexes are found in coated vesicles and clathrin-coated pits. AP complexes connect cargo proteins and lipids to clathrin at vesicle budding sites, as well as binding accessory proteins that regulate coat assembly and disassembly (such as AP180, epsins and auxilin). There are different AP complexes in mammals. AP1 is responsible for the transport of lysosomal hydrolases between the TGN and endosomes []. AP2 associates with the plasma membrane and is responsible for endocytosis []. AP3 is responsible for protein trafficking to lysosomes and other related organelles []. AP4 is less well characterised. AP complexes are heterotetramers composed of two large subunits (adaptins), a medium subunit (mu) and a small subunit (sigma). For example, in AP1 these subunits are gamma-1-adaptin, beta-1-adaptin, mu-1 and sigma-1, while in AP2 they are alpha-adaptin, beta-2-adaptin, mu-2 and sigma-2. Each subunit has a specific function. Adaptins recognise and bind to clathrin through their hinge region (clathrin box), and recruit accessory proteins that modulate AP function through their C-terminal ear (appendage) domains. Mu recognises tyrosine-based sorting signals within the cytoplasmic domains of transmembrane cargo proteins []. One function of clathrin and AP2 complex-mediated endocytosis is to regulate the number of GABA(A) receptors available at the cell surface []. This entry represents the mu subunit of various clathrin adaptors (AP1, AP2 and AP3) []. The mu subunit regulates the coupling of clathrin lattices with particular membrane proteins by self-phosphorylation via a mechanism that is still unclear []. The mu subunit possesses a highly conserved N-terminal domain of around 230 amino acids, which may be the region of interaction with other AP proteins; a linker region of between 10 and 42 amino acids; and a less well-conserved C-terminal domain of around 190 amino acids, which may be the site of specific interaction with the protein being transported in the vesicle []. Short Name:  Clathrin_mu

0 Child Features

2 Contains

DB identifier Type Name
IPR011012 Domain Longin-like domain
IPR018240 Conserved_site Clathrin adaptor, mu subunit, conserved site

2 Cross Referencess

Identifier
PIRSF005992
PR00314

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0006886 IPR001392
GO:0016192 IPR001392
GO:0030131 IPR001392

3 Ontology Annotations

GO Term Gene Name
GO:0006886 IPR001392
GO:0016192 IPR001392
GO:0030131 IPR001392

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
141330 D8QVP5 PAC:15408836 Selaginella moellendorffii 446  
173172 D8RQL1 PAC:15412601 Selaginella moellendorffii 438  
109656 D8S5V7 PAC:15405783 Selaginella moellendorffii 415  
91068 D8RD97 PAC:15412518 Selaginella moellendorffii 431  
evm.model.supercontig_172.13 PAC:16410943 Carica papaya 462  
evm.model.supercontig_21.5 PAC:16413561 Carica papaya 451  
evm.model.supercontig_35.63 PAC:16418184 Carica papaya 334  
evm.model.supercontig_48.192 PAC:16420831 Carica papaya 401  
evm.model.supercontig_69.96 PAC:16424971 Carica papaya 428  
29827.m002545 B9S1G6 PAC:16809979 Ricinus communis 408  
29908.m006251 B9RJW2 PAC:16813064 Ricinus communis 421  
30128.m008937 B9RFL9 PAC:16818523 Ricinus communis 415  
30147.m013894 B9RAX0 PAC:16819910 Ricinus communis 428  
30170.m014088 B9R7Z0 PAC:16821924 Ricinus communis 472  
27504.m000626 B9SPJ2 PAC:16798536 Ricinus communis 309  
Cucsa.313280.1 A0A0A0LI53 PAC:16976979 Cucumis sativus 438  
Cucsa.342660.1 PAC:16979405 Cucumis sativus 451  
Cucsa.180660.1 PAC:16967336 Cucumis sativus 433  
Cucsa.180660.2 PAC:16967337 Cucumis sativus 415  
Cucsa.180660.5 PAC:16967340 Cucumis sativus 413  
Cucsa.286350.2 A0A0A0KTL2 PAC:16975003 Cucumis sativus 428  
Cucsa.286350.1 PAC:16975002 Cucumis sativus 429  
orange1.1g014292m A0A067GPQ1 PAC:18108219 Citrus sinensis 427  
orange1.1g014970m A0A067GSF9 PAC:18108220 Citrus sinensis 415  
orange1.1g017238m A0A067H230 PAC:18108221 Citrus sinensis 375  
orange1.1g022308m A0A067H1M3 PAC:18108222 Citrus sinensis 299  
orange1.1g013029m A0A067H0R9 PAC:18108046 Citrus sinensis 451  
orange1.1g014251m A0A067G1C7 PAC:18132374 Citrus sinensis 428  
orange1.1g021018m A0A067FQ78 PAC:18132375 Citrus sinensis 318  
orange1.1g021754m A0A067FTK7 PAC:18132377 Citrus sinensis 308  

10 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15261670
            17449236
            11598180
            1761056
            11080148
            11583591
            15107467
            12952931
            16542748
            17254016