Protein Domain : IPR010643

Type:  Domain Name:  Helical and beta-bridge domain
Description:  HBB is the domain on DEAD-box eukaryotic DNA repair helicases () that appears to be a unique fold. It's conformation is of alpha-helices 12-16 plus a short beta-bridge to the FeS-cluster domain at the N-terminal. The full-length XPD protein verifies the presence of damage to DNA and allows DNA repair to proceed. XPD is an assembly of several domains to form a doughnut-shaped molecule that is able to separate two DNA strands and scan the DNA for damage. HBB helps to form the overall DNA-clamping architecture []. This family represents a conserved region within a number of eukaryotic DNA repair helicases (). Short Name:  HBB
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0 Child Features

0 Contains

1 Cross References

Identifier
PF06777

1 Found In

DB identifier Type Name
IPR001945 Family Xeroderma pigmentosum group D protein

1 GO Annotation

GO Term Gene Name
GO:0005634 IPR010643

1 Ontology Annotations

GO Term Gene Name
GO:0005634 IPR010643

0 Parent Features

488 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
91042 D8RDK7 PAC:15412468 Selaginella moellendorffii 768  
evm.model.supercontig_52.27 PAC:16422048 Carica papaya 672  
29647.m002100 B9S438 PAC:16804743 Ricinus communis 758  
Cucsa.084590.2 PAC:16956557 Cucumis sativus 674  
Cucsa.084590.1 A0A0A0K5Q0 PAC:16956556 Cucumis sativus 758  
orange1.1g007505m A0A067FMZ8 PAC:18093349 Citrus sinensis 601  
orange1.1g006790m A0A067FN33 PAC:18093348 Citrus sinensis 631  
orange1.1g012244m A0A067FRJ6 PAC:18093350 Citrus sinensis 467  
orange1.1g004358m A0A067FRJ1 PAC:18093345 Citrus sinensis 759  
orange1.1g004910m A0A067FZ93 PAC:18093347 Citrus sinensis 724  
orange1.1g004385m A0A067FZZ0 PAC:18093346 Citrus sinensis 757  
AT1G03190.1 Q8W4M7 PAC:19656528 Arabidopsis thaliana 758  
AT1G03190.2 Q8W4M7 PAC:19656529 Arabidopsis thaliana 758  
Thhalv10007130m V4KFS1 PAC:20188755 Eutrema salsugineum 601  
Thhalv10006888m V4KZ34 PAC:20188754 Eutrema salsugineum 758  
Thhalv10011297m V4KHY7 PAC:20184046 Eutrema salsugineum 660  
Thhalv10011338m V4KTX1 PAC:20184047 Eutrema salsugineum 591  
Ciclev10018975m V4TZX9 PAC:20810240 Citrus clementina 759  
Ciclev10019384m V4VVL3 PAC:20810241 Citrus clementina 601  
Lus10014662 PAC:23165644 Linum usitatissimum 758  
Potri.002G054000.1 B9GSP7 PAC:27024462 Populus trichocarpa 758  
Gorai.004G081200.1 A0A0D2RVH9 PAC:26773660 Gossypium raimondii 758  
Gorai.007G136500.1 A0A0D2SCT7 PAC:26778385 Gossypium raimondii 758  
11765 I0Z847 PAC:27393644 Coccomyxa subellipsoidea C-169 771  
45209 C1MJ87 PAC:27345328 Micromonas pusilla CCMP1545 741  
56496 C1DZL6 PAC:27396104 Micromonas sp RCC299 797  
26944 A4S605 PAC:27417136 Ostreococcus lucimarinus 788  
Thecc1EG004402t1 A0A061DQV7 PAC:27436443 Theobroma cacao 780  
Thecc1EG004402t4 A0A061DQ17 PAC:27436445 Theobroma cacao 683  
Thecc1EG004402t3 A0A061DPQ8 PAC:27436444 Theobroma cacao 758  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            18578568