Protein Domain : IPR008921

Type:  Domain Name:  DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
Description:  The Escherichia coliDNA polymerase III gamma complex clamp loader assembles the ring-shaped beta sliding clamp onto DNA. The core polymerase is tethered to the template by beta, enabling progressive replication of the genome. The E. coli complex clamp loader contains five different subunits, clamp loading only requires 3 of these - the gamma, delta, delta' complex. Three gamma subunits, and one each of delta and delta', are arranged in a circle. Each subunit adopts the same chain topology, and folds into three domains. However, the relative orientation of these domains is different for each subunit. The carboxy-terminal domains provide the major subunit contacts of the pentamer, although other intersubunit contacts are present. The amino-terminal domains do not form a continuous circle. These domains are arranged in a highly asymmetric fashion, and appear to dangle under the carboxy-terminal pentamer 'umbrella' []. Short Name:  DNA_pol3_clamp-load_cplx_C

4 Child Features

DB identifier Type Name
IPR022754 Domain DNA polymerase III, gamma subunit, domain III
IPR013748 Domain Replication factor C, C-terminal
IPR021886 Domain MgsA AAA+ ATPase C-terminal
IPR015199 Domain DNA polymerase III, delta subunit, C-terminal

0 Contains

1 Cross References

Identifier
SSF48019

3 Found Ins

DB identifier Type Name
IPR012178 Family Replication factor C subunit 1
IPR012763 Family DNA polymerase III, subunit gamma/ tau
IPR005790 Family DNA polymerase III, delta subunit

2 GO Annotations

GO Term Gene Name
GO:0003677 IPR008921
GO:0006260 IPR008921

2 Ontology Annotations

GO Term Gene Name
GO:0003677 IPR008921
GO:0006260 IPR008921

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
231444 D8RFU2 PAC:15416761 Selaginella moellendorffii 411  
80248 D8QY21 PAC:15403741 Selaginella moellendorffii 465  
420117 D8SB09 PAC:15410565 Selaginella moellendorffii 1291  
121188 D8SN98 PAC:15415485 Selaginella moellendorffii 354  
123078 D8SR37 PAC:15420486 Selaginella moellendorffii 345  
235493 D8SY80 PAC:15406213 Selaginella moellendorffii 332  
90486 D8RCM3 PAC:15412682 Selaginella moellendorffii 326  
evm.model.supercontig_103.53 PAC:16404939 Carica papaya 870  
evm.model.supercontig_161.34 PAC:16410204 Carica papaya 354  
evm.model.supercontig_173.1 PAC:16410961 Carica papaya 1034  
evm.model.supercontig_33.201 PAC:16417655 Carica papaya 580  
evm.model.supercontig_332.3 PAC:16417764 Carica papaya 548  
evm.model.supercontig_6.141 PAC:16423311 Carica papaya 797  
evm.model.supercontig_64.112 PAC:16424183 Carica papaya 348  
evm.model.supercontig_64.131 PAC:16424204 Carica papaya 162  
evm.model.supercontig_7.115 PAC:16425015 Carica papaya 1224  
evm.model.supercontig_74.70 PAC:16425764 Carica papaya 333  
30026.m001478 B9S8E5 PAC:16815863 Ricinus communis 1105  
30063.m001409 B9S048 PAC:16816366 Ricinus communis 1270  
30072.m000942 B9SI66 PAC:16816732 Ricinus communis 342  
30147.m013823 B9RAP9 PAC:16819839 Ricinus communis 1025  
30190.m011152 B9RC55 PAC:16823510 Ricinus communis 333  
57549.m000013 B9TJX7 PAC:16829059 Ricinus communis 342  
29634.m002116 B9S6E2 PAC:16804257 Ricinus communis 779  
29648.m002014 B9S2X4 PAC:16804855 Ricinus communis 360  
29648.m002000 B9S2W1 PAC:16804842 Ricinus communis 342  
28098.m000127 B9T608 PAC:16799935 Ricinus communis 661  
29434.m000030 B9TB58 PAC:16802856 Ricinus communis 422  
Cucsa.320140.1 A0A0A0L763 PAC:16977311 Cucumis sativus 331  
Cucsa.047160.1 A0A0A0KHX7 PAC:16953626 Cucumis sativus 1178  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11719243