Protein Domain : IPR001371

Type:  Family Name:  Glycoside hydrolase, family 14B, plant
Description:  O-Glycosyl hydrolases () are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site.Family 14 (, ) encompasses the beta-amylase enzymes. Beta-amylases, which are found in plants and bacteria, hydrolyse 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates, removingsuccessive maltose units from the non-reducing ends of the chains. In Solanum tuberosum(potato), the enzyme has been found to work optimally at 40 degrees C, becoming unstable above this temperature. On the basis of sequencecomparisons, plant and bacterial beta-amylases can be readily distinguished from each other.The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-raydiffraction []. The enzyme folds into large and small domains: the largedomain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strandsof the (beta alpha)8 fold []. The interface of the two domains, togetherwith shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft,one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft []. Short Name:  Glyco_hydro_14B_pln

0 Child Features

2 Contains

DB identifier Type Name
IPR013781 Domain Glycoside hydrolase, catalytic domain
IPR018238 Conserved_site Glycoside hydrolase, family 14, conserved site

1 Cross References

Identifier
PR00842

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0016161 IPR001371
GO:0000272 IPR001371

2 Ontology Annotations

GO Term Gene Name
GO:0016161 IPR001371
GO:0000272 IPR001371

1 Parent Features

DB identifier Type Name
IPR001554 Family Glycoside hydrolase, family 14

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
145994 D8RCV1 PAC:15402926 Selaginella moellendorffii 464  
evm.model.supercontig_18.252 PAC:16411407 Carica papaya 760  
evm.model.supercontig_18.253 PAC:16411408 Carica papaya 504  
evm.model.supercontig_59.40 PAC:16423178 Carica papaya 574  
29904.m003046 B9RWS7 PAC:16812689 Ricinus communis 574  
30174.m009027 B9RDR8 PAC:16822668 Ricinus communis 704  
30174.m009028 B9RDR9 PAC:16822669 Ricinus communis 609  
Cucsa.135490.2 A0A0A0K844 PAC:16962937 Cucumis sativus 698  
Cucsa.135490.1 PAC:16962936 Cucumis sativus 699  
Cucsa.255940.1 PAC:16972470 Cucumis sativus 577  
orange1.1g010067m A0A067F9K7 PAC:18094608 Citrus sinensis 519  
orange1.1g008542m A0A067H2E4 PAC:18136418 Citrus sinensis 562  
orange1.1g008030m A0A067EKR2 PAC:18105231 Citrus sinensis 580  
AT4G00490.1 O65258 PAC:19645464 Arabidopsis thaliana 542  
AT4G15210.2 P25853 PAC:19648974 Arabidopsis thaliana 420  
AT4G15210.1 P25853 PAC:19648973 Arabidopsis thaliana 498  
AT4G17090.1 O23553 PAC:19646345 Arabidopsis thaliana 548  
AT5G55700.2 PAC:19666183 Arabidopsis thaliana 489  
AT5G55700.1 Q9FM68 PAC:19666182 Arabidopsis thaliana 531  
AT3G23920.1 Q9LIR6 PAC:19659515 Arabidopsis thaliana 575  
AT2G32290.1 Q8L762 PAC:19638428 Arabidopsis thaliana 577  
Thhalv10024842m V4LYH6 PAC:20193436 Eutrema salsugineum 548  
Thhalv10013225m V4KXZ0 PAC:20205488 Eutrema salsugineum 531  
Thhalv10028560m V4KIN3 PAC:20196911 Eutrema salsugineum 546  
Thhalv10002460m V4MXJ8 PAC:20196481 Eutrema salsugineum 582  
Ciclev10019525m V4U7Y0 PAC:20810090 Citrus clementina 562  
Ciclev10019566m V4VKW5 PAC:20811724 Citrus clementina 551  
Ciclev10014929m V4TJV0 PAC:20814995 Citrus clementina 519  
Ciclev10004620m V4S9Q6 PAC:20792330 Citrus clementina 580  
Lus10017820 PAC:23177694 Linum usitatissimum 480  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            7624375
            8535779
            1491009