Protein Domain : IPR016190

Type:  Domain Name:  Translation initiation factor IF2/IF5, zinc-binding
Description:  The beta subunit of archaeal and eukaryotic translation initiation factor 2 (IF2beta) and the N-terminal domain of translation initiation factor 5 (IF5) show significant sequence homology []. Archaeal IF2beta contains two independent structural domains: an N-terminal mixed alpha/beta core domain (topological similarity to the common core of ribosomal proteins L23 and L15e), and a C-terminal domain consisting of a zinc-binding C4 finger []. Archaeal IF2beta is a ribosome-dependent GTPase that stimulates the binding of initiator Met-tRNA(i)(Met) to the ribosomes, even in the absence of other factors []. The C-terminal domain of eukaryotic IF5 is involved in the formation of the multi-factor complex (MFC), an important intermediate for the 43S pre-initiation complex assembly []. IF5 interacts directly with IF1, IF2beta and IF3c, which together with IF2-bound Met-tRNA(i)(Met) form the MFC.This entry represents the zinc-binding C4 domain with a zinc-bound beta-ribbon motif, which is found in IF2beta and IF5 []. Short Name:  Transl_init_fac_IF2/IF5_Zn-bd

0 Child Features

0 Contains

1 Cross References

Identifier
SSF75689

2 Found Ins

DB identifier Type Name
IPR002735 Domain Translation initiation factor IF2/IF5
IPR004458 Family Translation initiation factor 2, beta subunit

2 GO Annotations

GO Term Gene Name
GO:0003743 IPR016190
GO:0006413 IPR016190

2 Ontology Annotations

GO Term Gene Name
GO:0003743 IPR016190
GO:0006413 IPR016190

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
170980 D8RFB0 PAC:15409937 Selaginella moellendorffii 274  
414577 D8RT82 PAC:15418236 Selaginella moellendorffii 946  
6561 D8RVH4 PAC:15422391 Selaginella moellendorffii 117  
6836 D8R460 PAC:15402335 Selaginella moellendorffii 115  
145941 D8RCK3 PAC:15402791 Selaginella moellendorffii 429  
evm.model.supercontig_116.7 PAC:16406329 Carica papaya 447  
evm.model.supercontig_2.283 PAC:16412656 Carica papaya 268  
evm.model.supercontig_49.123 PAC:16421035 Carica papaya 433  
29908.m005952 B9RJC4 PAC:16812776 Ricinus communis 447  
29976.m000514 B9SD93 PAC:16814802 Ricinus communis 73  
Cucsa.112030.1 PAC:16960126 Cucumis sativus 82  
Cucsa.200090.1 A0A0A0LY41 PAC:16968738 Cucumis sativus 270  
Cucsa.381340.2 A0A0A0LMB4 PAC:16982237 Cucumis sativus 444  
Cucsa.381340.1 A0A0A0LMB4 PAC:16982236 Cucumis sativus 444  
Cucsa.381340.3 A0A0A0LMB4 PAC:16982238 Cucumis sativus 444  
orange1.1g013311m A0A067GM80 PAC:18107309 Citrus sinensis 445  
orange1.1g025050m A0A067GCF0 PAC:18138499 Citrus sinensis 258  
orange1.1g024241m A0A067GPL2 PAC:18138498 Citrus sinensis 270  
orange1.1g047170m A0A067FDC8 PAC:18107066 Citrus sinensis 89  
orange1.1g013781m A0A067F763 PAC:18131159 Citrus sinensis 436  
orange1.1g013773m A0A067F763 PAC:18131160 Citrus sinensis 436  
AT5G01940.1 Q9LZV2 PAC:19670772 Arabidopsis thaliana 231  
AT5G20920.3 Q41969 PAC:19668355 Arabidopsis thaliana 268  
AT5G20920.2 Q41969 PAC:19668356 Arabidopsis thaliana 267  
AT5G20920.1 Q41969 PAC:19668354 Arabidopsis thaliana 268  
AT3G07920.1 F4JFQ0 PAC:19660668 Arabidopsis thaliana 164  
AT1G36730.1 Q9C8F1 PAC:19649840 Arabidopsis thaliana 439  
AT1G77840.1 Q9S825 PAC:19649259 Arabidopsis thaliana 437  
Thhalv10022299m V4LZE2 PAC:20183859 Eutrema salsugineum 264  
Thhalv10014626m V4LJR2 PAC:20206252 Eutrema salsugineum 220  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11980477
            14978306
            16781736
            17608795