Protein Domain : IPR003822

Type:  Repeat Name:  Paired amphipathic helix
Description:  This entry represents the paired amphipathic helix (PAH) repeat. Sin3 proteins have at least three PAH domains (PAH1, PAH2, and PAH3). They are components of a co-repressor complex that silences transcription, playing important roles in the transition between proliferation and differentiation. Sin3 proteins are recruited to the DNA by various DNA-binding transcription factors such as the Mad family of repressors, Mnt/Rox, PLZF, MeCP2, p53, REST/NRSF, MNFbeta, Sp1, TGIF and Ume6 []. Sin3 acts as a scaffold protein that in turn recruits histone-binding proteins RbAp46/RbAp48 and histone deacetylases HDAC1/HDAC2, which deacetylate the core histones resulting in a repressed state of the chromatin []. The PAH domains are protein-protein interaction domains through which Sin3 fulfils its role as a scaffold. The PAH2 domain of Sin3 can interact with a wide range of unrelated and structurally diverse transcription factors that bind using different interaction motifs. For example, the Sin3 PAH2 domain can interact with the unrelated Mad and HBP1 factors using alternative interaction motifs that involve binding in opposite helical orientations []. Short Name:  PAH

0 Child Features

0 Contains

4 Cross Referencess

Identifier
PF02671
PS51477
G3DSA:1.20.1160.11
SSF47762

0 Found In

1 GO Annotation

GO Term Gene Name
GO:0006355 IPR003822

1 Ontology Annotations

GO Term Gene Name
GO:0006355 IPR003822

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
60165 D8RHJ6 PAC:15411132 Selaginella moellendorffii 1070  
440352 D8RB70 PAC:15404105 Selaginella moellendorffii 1935  
evm.TU.contig_28922.1 PAC:16429649 Carica papaya 452  
evm.TU.contig_46017.1 PAC:16432247 Carica papaya 26  
evm.model.supercontig_5.318 PAC:16421438 Carica papaya 893  
evm.model.supercontig_83.5 PAC:16427189 Carica papaya 369  
evm.model.supercontig_83.8 PAC:16427222 Carica papaya 292  
evm.model.supercontig_83.9 PAC:16427233 Carica papaya 398  
29736.m002095 B9S2H7 PAC:16807200 Ricinus communis 1452  
29751.m001789 B9S359 PAC:16807798 Ricinus communis 252  
29822.m003411 B9RUG4 PAC:16809781 Ricinus communis 187  
29822.m003424 B9RUH7 PAC:16809794 Ricinus communis 1289  
29904.m002929 B9RWG2 PAC:16812574 Ricinus communis 379  
30014.m000441 B9SSA5 PAC:16815662 Ricinus communis 86  
30014.m000442 B9SSA6 PAC:16815663 Ricinus communis 83  
30071.m000431 B9STE9 PAC:16816696 Ricinus communis 84  
30071.m000432 B9STF0 PAC:16816697 Ricinus communis 90  
30076.m004581 B9RN70 PAC:16817193 Ricinus communis 658  
Cucsa.128420.1 PAC:16962169 Cucumis sativus 860  
Cucsa.128420.2 A0A0A0K864 PAC:16962170 Cucumis sativus 824  
Cucsa.195020.1 A0A0A0L9W0 PAC:16968180 Cucumis sativus 1410  
Cucsa.275250.1 PAC:16973960 Cucumis sativus 1390  
Cucsa.275250.2 PAC:16973961 Cucumis sativus 1389  
Cucsa.285650.2 PAC:16974877 Cucumis sativus 1442  
Cucsa.285650.1 PAC:16974876 Cucumis sativus 1442  
Cucsa.285650.4 PAC:16974879 Cucumis sativus 1442  
Cucsa.285650.5 PAC:16974880 Cucumis sativus 1426  
Cucsa.285650.6 PAC:16974881 Cucumis sativus 1422  
Cucsa.285650.3 PAC:16974878 Cucumis sativus 1442  
Cucsa.285650.7 PAC:16974882 Cucumis sativus 1406  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11101889
            14705930
            15235594