Protein Domain : IPR025995

Type:  Domain Name:  RNA binding activity-knot of a chromodomain
Description:  This is a novel knotted tudor domain which is required for binding to RNA. The knot influences the loop conformation of the helical turn Ht2 (residues 61-63) that is located at the side opposite the knot in the tudor domain-chromo domain; stabilisation of Ht2 is essential for RNA binding []. Short Name:  Tudor-knot
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0 Child Features

0 Contains

1 Cross References

Identifier
PF11717

0 Found In

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR000953 Domain Chromo/chromo shadow domain

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
84658 D8R327 PAC:15418631 Selaginella moellendorffii 408  
270711 D8RBH0 PAC:15422451 Selaginella moellendorffii 288  
evm.model.supercontig_42.140 PAC:16419724 Carica papaya 170  
evm.model.supercontig_6.94 PAC:16423690 Carica papaya 318  
29908.m006218 B9RJB9 PAC:16813034 Ricinus communis 445  
29970.m000990 B9SG10 PAC:16814681 Ricinus communis 318  
30170.m013695 B9R754 PAC:16821542 Ricinus communis 341  
Cucsa.352570.1 A0A0A0L0E2 PAC:16980023 Cucumis sativus 313  
Cucsa.352570.2 PAC:16980024 Cucumis sativus 307  
Cucsa.102720.1 PAC:16958917 Cucumis sativus 319  
Cucsa.034450.1 A0A0A0KRK8 PAC:16952600 Cucumis sativus 448  
orange1.1g013121m A0A067GZD9 PAC:18107527 Citrus sinensis 449  
orange1.1g021037m A0A067GH65 PAC:18124872 Citrus sinensis 318  
orange1.1g020039m PAC:18092523 Citrus sinensis 332  
orange1.1g020442m PAC:18092524 Citrus sinensis 326  
orange1.1g020399m PAC:18092525 Citrus sinensis 326  
orange1.1g023955m PAC:18092528 Citrus sinensis 275  
orange1.1g022143m PAC:18092526 Citrus sinensis 302  
orange1.1g023923m PAC:18092529 Citrus sinensis 275  
orange1.1g023917m PAC:18092527 Citrus sinensis 275  
AT4G37280.1 Q94C32 PAC:19645339 Arabidopsis thaliana 320  
AT5G09740.2 PAC:19670426 Arabidopsis thaliana 367  
AT5G09740.1 Q9LXD7 PAC:19670425 Arabidopsis thaliana 445  
AT5G64610.1 Q9FLF7 PAC:19672539 Arabidopsis thaliana 445  
AT1G02740.1 Q4V3E2 PAC:19653154 Arabidopsis thaliana 327  
Thhalv10025747m V4LRX6 PAC:20194563 Eutrema salsugineum 320  
Thhalv10013550m V4LB57 PAC:20205803 Eutrema salsugineum 444  
Thhalv10008162m V4LA73 PAC:20188119 Eutrema salsugineum 331  
Thhalv10004220m V4KJM1 PAC:20198153 Eutrema salsugineum 445  
Ciclev10001133m V4T7A2 PAC:20787796 Citrus clementina 449  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            18407291