Protein Domain : IPR002671

Type:  Family Name:  Ribosomal protein L22e
Description:  Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ].Ribosomal protein L22e forms part of the 60S ribosomal subunit []. This family is found in eukaryotes. Rattus norvegicus(Rat) L22 is related to ribosomal proteins from other eukaryotes and is identical in amino acid sequence to human EAP, the EBER 1 (Epstein-Barr virus(strain GD1) (HHV-4) (Human herpesvirus 4) encoded RNA) associated protein []. Short Name:  Ribosomal_L22e

1 Child Features

DB identifier Type Name
IPR028370 Family 60S ribosomal protein L22-like 1

0 Contains

2 Cross Referencess

Identifier
PTHR10064
PF01776

0 Found In

4 GO Annotations

GO Term Gene Name
GO:0003735 IPR002671
GO:0006412 IPR002671
GO:0005622 IPR002671
GO:0005840 IPR002671

4 Ontology Annotations

GO Term Gene Name
GO:0003735 IPR002671
GO:0006412 IPR002671
GO:0005622 IPR002671
GO:0005840 IPR002671

0 Parent Features

908 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
270704 D8RB37 PAC:15422421 Selaginella moellendorffii 128  
evm.model.supercontig_327.7 PAC:16417521 Carica papaya 124  
evm.model.supercontig_9.259 PAC:16428156 Carica papaya 114  
29726.m004061 B9RT70 PAC:16806772 Ricinus communis 127  
29986.m001621 B9SAS1 PAC:16815119 Ricinus communis 126  
30128.m008842 B9RFC4 PAC:16818428 Ricinus communis 125  
Cucsa.181890.1 PAC:16967443 Cucumis sativus 124  
Cucsa.181890.2 PAC:16967444 Cucumis sativus 124  
Cucsa.181890.3 A0A0A0M1I7 PAC:16967445 Cucumis sativus 93  
Cucsa.205550.1 A0A0A0K637 PAC:16969118 Cucumis sativus 126  
Cucsa.216530.1 PAC:16969569 Cucumis sativus 64  
orange1.1g043767m A0A067G028 PAC:18109838 Citrus sinensis 105  
orange1.1g033169m A0A067HH07 PAC:18137383 Citrus sinensis 125  
AT5G27770.1 Q9FE58 PAC:19668600 Arabidopsis thaliana 124  
AT3G05560.3 Q9M9W1 PAC:19665195 Arabidopsis thaliana 124  
AT3G05560.2 Q9M9W1 PAC:19665194 Arabidopsis thaliana 124  
AT3G05560.1 Q9M9W1 PAC:19665193 Arabidopsis thaliana 124  
AT1G02830.1 Q9SRX7 PAC:19655162 Arabidopsis thaliana 127  
Thhalv10021770m V4NS91 PAC:20182624 Eutrema salsugineum 124  
Thhalv10009107m V4L2Z5 PAC:20185477 Eutrema salsugineum 128  
Thhalv10005133m V4MLB1 PAC:20199249 Eutrema salsugineum 124  
Ciclev10022870m V4U5Y8 PAC:20811532 Citrus clementina 125  
Ciclev10006199m PAC:20789630 Citrus clementina 132  
Lus10037498 PAC:23167028 Linum usitatissimum 127  
Lus10006509 PAC:23141642 Linum usitatissimum 127  
Lus10026555 PAC:23164350 Linum usitatissimum 81  
Potri.010G012700.1 A0A2K1YM71 PAC:26981433 Populus trichocarpa 144  
Potri.010G012700.2 A9P8A8 PAC:26981434 Populus trichocarpa 127  
Potri.002G204100.1 A9P9U4 PAC:27020175 Populus trichocarpa 125  
Potri.002G204100.2 A9P9U4 PAC:27020174 Populus trichocarpa 125  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11297922
            11290319
            11114498
            1840484
            7999786