Protein Domain : IPR011038

Type:  Domain Name:  Calycin-like
Description:  Calycins form a large protein superfamily that share similar beta-barrel structures. Calycins can be divided into families that include lipocalins, fatty acid binding proteins, triabin, and thrombin inhibitor []. Of these families, the lipocalin family () is the largest and functionally the most diverse. Lipocalins are extracellular proteins that share several common recognition properties such as ligand binding, receptor binding and the formation of complexes with other macromolecules. Lipocalins include the retinol binding protein, lipocalin allergen, aphrodisin (a sex hormone), alpha-2U-globulin, prostaglandin D synthase, beta-lactoglobulin, bilin-binding protein, and the nitrophorins [, , , ]. Bacterial hypothetical proteins YodA from Escherichia coliand YwiB from Bacillus subtilisshare a similar calycin beta-barrel structure. Part of the YodA hypothetical protein has a calycin-like structure [].This entry represents calycin as well as some other proteins that share a similar calycin beta-barrel structure, including UPF0678 fatty acid-binding protein-like proteins []. Short Name:  Calycin-like

1 Child Features

DB identifier Type Name
IPR012674 Domain Calycin

1 Contains

DB identifier Type Name
IPR022272 Conserved_site Lipocalin family conserved site

1 Cross References

Identifier
SSF50814

8 Found Ins

DB identifier Type Name
IPR022271 Family Lipocalin, ApoD type
IPR002345 Family Lipocalin
IPR002968 Family Alpha-1-microglobulin
IPR002969 Family Apolipoprotein D
IPR002970 Family Tick histamine-binding protein
IPR003057 Family Invertebrate colouration protein
IPR022734 Family Apolipoprotein M
IPR015231 Family Protein of unknown function DUF1934

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
98590 D8RNU7 PAC:15414626 Selaginella moellendorffii 258  
438737 D8QZ27 PAC:15423311 Selaginella moellendorffii 928  
81134 D8QZF6 PAC:15405921 Selaginella moellendorffii 316  
155397 D8SHJ4 PAC:15405541 Selaginella moellendorffii 199  
156974 D8SNP0 PAC:15413135 Selaginella moellendorffii 209  
121553 D8SNX7 PAC:15418400 Selaginella moellendorffii 335  
29439 D8SQ77 PAC:15410848 Selaginella moellendorffii 98  
85565 D8R677 PAC:15420787 Selaginella moellendorffii 377  
125344 D8SUQ2 PAC:15406155 Selaginella moellendorffii 214  
125245 D8SUQ6 PAC:15405364 Selaginella moellendorffii 212  
408493 D8R8H4 PAC:15421904 Selaginella moellendorffii 534  
165176 D8QSX1 PAC:15411270 Selaginella moellendorffii 166  
440097 D8RA31 PAC:15402002 Selaginella moellendorffii 919  
126771 D8SX11 PAC:15412284 Selaginella moellendorffii 213  
evm.model.supercontig_22.25 PAC:16413862 Carica papaya 358  
evm.model.supercontig_43.125 PAC:16419935 Carica papaya 185  
evm.model.supercontig_51.78 PAC:16421897 Carica papaya 479  
evm.model.supercontig_97.37 PAC:16429072 Carica papaya 332  
29709.m001168 B9SKK3 PAC:16806386 Ricinus communis 484  
29737.m001222 B9SBY6 PAC:16807241 Ricinus communis 187  
29950.m001179 B9SHK4 PAC:16814453 Ricinus communis 484  
31174.m000025 B9TE65 PAC:16824856 Ricinus communis 149  
29666.m001483 B9SAI0 PAC:16805177 Ricinus communis 341  
28124.m000248 B9T3U0 PAC:16799987 Ricinus communis 386  
Cucsa.118730.5 PAC:16960872 Cucumis sativus 137  
Cucsa.118730.2 A0A0A0KAL2 PAC:16960869 Cucumis sativus 170  
Cucsa.118730.3 A0A0A0KAL2 PAC:16960870 Cucumis sativus 170  
Cucsa.118730.4 A0A0A0KAL2 PAC:16960871 Cucumis sativus 170  
Cucsa.118730.6 PAC:16960873 Cucumis sativus 133  
Cucsa.118730.1 A0A0A0KAL2 PAC:16960868 Cucumis sativus 170  

7 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11058743
            11058763
            11058769
            11058756
            12432930
            12909634
            19938152