Protein Domain : IPR012990

Type:  Domain Name:  Sec23/Sec24 beta-sandwich
Description:  COPII (coat protein complex II)-coated vesicles carry proteins from the endoplasmic reticulum (ER) to the Golgi complex []. COPII-coated vesicles form on the ER by the stepwise recruitment of three cytosolic components: Sar1-GTP to initiate coat formation, Sec23/24 heterodimer to select SNARE and cargo molecules, and Sec13/31 to induce coat polymerisation and membrane deformation []. Sec23 p and Sec24p are structurally related, folding into five distinct domains: a beta-barrel, a zinc-finger (), an alpha/beta trunk domain (), an all-helical region (), and a C-terminal gelsolin-like domain (). This entry describes part of the Sec23/24 beta-barrel domain, which is formed from approximately 180 residues from three segments of the polypeptide. The strands of the barrel are oriented roughly parallel to the membrane such that one end of the barrel forms part of the inner surface of the coat and the other end part of the membrane-distal surface. The barrel is constructed from two opposed sheets: a six-stranded beta sheet facing partly towards the zinc finger domain and partly towards the solvent, and a five-stranded beta sheet facing the helical domain. Short Name:  Sec23_24_beta_S

0 Child Features

0 Contains

1 Cross References

Identifier
PF08033

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
107900 D8S3I7 PAC:15402145 Selaginella moellendorffii 763  
168140 D8R5T0 PAC:15419910 Selaginella moellendorffii 756  
157789 D8SRY9 PAC:15414599 Selaginella moellendorffii 898  
89582 D8RB14 PAC:15410266 Selaginella moellendorffii 704  
140536 D8QRN3 PAC:15407376 Selaginella moellendorffii 979  
evm.model.supercontig_157.12 PAC:16409797 Carica papaya 775  
evm.model.supercontig_25.38 PAC:16414831 Carica papaya 989  
evm.model.supercontig_264.15 PAC:16415414 Carica papaya 692  
evm.model.supercontig_57.13 PAC:16422832 Carica papaya 593  
evm.model.supercontig_64.94 PAC:16424332 Carica papaya 372  
29709.m001233 B9SKJ9 PAC:16806449 Ricinus communis 761  
29844.m003173 B9RTF3 PAC:16810881 Ricinus communis 782  
29908.m006131 B9RJ34 PAC:16812949 Ricinus communis 1056  
30076.m004553 B9RN42 PAC:16817165 Ricinus communis 834  
30128.m008634 B9RET0 PAC:16818224 Ricinus communis 1094  
30183.m001308 B9RRN0 PAC:16822993 Ricinus communis 782  
29337.m000224 B9T474 PAC:16802733 Ricinus communis 1031  
Cucsa.362480.1 PAC:16980930 Cucumis sativus 690  
Cucsa.383190.1 A0A0A0LKI8 PAC:16982337 Cucumis sativus 1105  
Cucsa.386630.1 A0A0A0LLL6 PAC:16982712 Cucumis sativus 783  
Cucsa.050860.2 A0A0A0LW45 PAC:16954144 Cucumis sativus 1031  
Cucsa.050860.4 PAC:16954146 Cucumis sativus 966  
Cucsa.050860.5 PAC:16954147 Cucumis sativus 915  
Cucsa.050860.1 A0A0A0LW45 PAC:16954143 Cucumis sativus 1031  
Cucsa.050860.3 A0A0A0LW45 PAC:16954145 Cucumis sativus 1031  
Cucsa.076220.1 PAC:16955830 Cucumis sativus 869  
Cucsa.076220.2 PAC:16955831 Cucumis sativus 869  
orange1.1g003269m PAC:18100011 Citrus sinensis 835  
orange1.1g001720m PAC:18100008 Citrus sinensis 1021  
orange1.1g001711m PAC:18100010 Citrus sinensis 1021  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11535824
            12239560