Protein Domain : IPR006900

Type:  Domain Name:  Sec23/Sec24, helical domain
Description:  COPII (coat protein complex II)-coated vesicles carry proteins from the endoplasmic reticulum (ER) to the Golgi complex []. COPII-coated vesicles form on the ER by the stepwise recruitment of three cytosolic components: Sar1-GTP to initiate coat formation, Sec23/24 heterodimer to select SNARE and cargo molecules, and Sec13/31 to induce coat polymerisation and membrane deformation []. Sec23 p and Sec24p are structurally related, folding into five distinct domains: a beta-barrel, a zinc-finger (), an alpha/beta trunk domain (), an all-helical region, and a C-terminal gelsolin-like domain (). This entry describes the all-helical domain, which forms an approximately 105-residue segment with the C-terminal 30 residues. The linker between alpha-M and alpha-N contacts Sar1. Short Name:  Sec23/24_helical_dom

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF04815
SSF81811

0 Found In

3 GO Annotations

GO Term Gene Name
GO:0006886 IPR006900
GO:0006888 IPR006900
GO:0030127 IPR006900

3 Ontology Annotations

GO Term Gene Name
GO:0006886 IPR006900
GO:0006888 IPR006900
GO:0030127 IPR006900

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
411850 D8RJ83 PAC:15411730 Selaginella moellendorffii 219  
416307 D8RYV8 PAC:15422268 Selaginella moellendorffii 386  
416300 D8RYV1 PAC:15422256 Selaginella moellendorffii 217  
107900 D8S3I7 PAC:15402145 Selaginella moellendorffii 763  
168140 D8R5T0 PAC:15419910 Selaginella moellendorffii 756  
157789 D8SRY9 PAC:15414599 Selaginella moellendorffii 898  
440407 D8RBJ6 PAC:15404755 Selaginella moellendorffii 733  
89582 D8RB14 PAC:15410266 Selaginella moellendorffii 704  
140536 D8QRN3 PAC:15407376 Selaginella moellendorffii 979  
evm.TU.contig_27826.1 PAC:16429525 Carica papaya 402  
evm.model.supercontig_157.12 PAC:16409797 Carica papaya 775  
evm.model.supercontig_25.38 PAC:16414831 Carica papaya 989  
evm.model.supercontig_264.15 PAC:16415414 Carica papaya 692  
evm.model.supercontig_3326.1 PAC:16417770 Carica papaya 262  
evm.model.supercontig_375.2 PAC:16418815 Carica papaya 682  
evm.model.supercontig_57.13 PAC:16422832 Carica papaya 593  
evm.model.supercontig_64.94 PAC:16424332 Carica papaya 372  
29709.m001233 B9SKJ9 PAC:16806449 Ricinus communis 761  
29844.m003173 B9RTF3 PAC:16810881 Ricinus communis 782  
29908.m006131 B9RJ34 PAC:16812949 Ricinus communis 1056  
30055.m001571 B9SCU8 PAC:16816202 Ricinus communis 740  
30076.m004553 B9RN42 PAC:16817165 Ricinus communis 834  
30128.m008634 B9RET0 PAC:16818224 Ricinus communis 1094  
30183.m001308 B9RRN0 PAC:16822993 Ricinus communis 782  
29337.m000224 B9T474 PAC:16802733 Ricinus communis 1031  
Cucsa.319870.1 PAC:16977302 Cucumis sativus 644  
Cucsa.362480.1 PAC:16980930 Cucumis sativus 690  
Cucsa.383190.1 A0A0A0LKI8 PAC:16982337 Cucumis sativus 1105  
Cucsa.386630.1 A0A0A0LLL6 PAC:16982712 Cucumis sativus 783  
Cucsa.050860.2 A0A0A0LW45 PAC:16954144 Cucumis sativus 1031  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11535824
            12239560