Protein Domain : IPR015946

Type:  Domain Name:  K homology domain-like, alpha/beta
Description:  The K homology domain is a common RNA-binding motif present in one or multiple copies in both prokaryotic and eukaryotic regulatory proteins. The KH motifs may act cooperatively to bind RNA in the case of multiple motifs, or independently in the case of single KH motif proteins. Prokaryotic (pKH) and eukaryotic (eKH) KH domains share a KH-motif, but have different topologies. The pKH domain has been found in a number of proteins, including the N-terminal domain of the S3 ribosomal protein [], the C-terminal domain of Era GTPase [] and the two C-terminal domains of the NusA transcription factor []. The structure of the pKH domain consists of a two-layer alpha/beta fold in the arrangement alpha/beta(2)/alpha/beta. This entry represents prokaryotic-type K homology domains, as well as related domains that share the same 2-layer alpha/beta structure. Short Name:  KH_dom-like_a/b

2 Child Features

DB identifier Type Name
IPR023799 Domain Ribosome-binding factor A domain
IPR024633 Domain DnaA N-terminal domain

2 Contains

DB identifier Type Name
IPR004087 Domain K Homology domain
IPR004044 Domain K Homology domain, type 2

1 Cross References

Identifier
G3DSA:3.30.300.20

3 Found Ins

DB identifier Type Name
IPR016484 Family GTP-binding protein EngA
IPR003718 Family OsmC/Ohr family
IPR019905 Family Peroxiredoxin OsmC-like protein, Firmicutes

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
413914 D8RR13 PAC:15418227 Selaginella moellendorffii 420  
105942 D8S0H5 PAC:15418750 Selaginella moellendorffii 471  
64762 D8R5L5 PAC:15404901 Selaginella moellendorffii 310  
48536 D8SVY2 PAC:15422910 Selaginella moellendorffii 162  
75698 D8QPT6 PAC:15414541 Selaginella moellendorffii 330  
429754 D8T769 PAC:15419197 Selaginella moellendorffii 674  
evm.model.supercontig_150.2 PAC:16409472 Carica papaya 224  
evm.model.supercontig_1627.2 PAC:16410287 Carica papaya 215  
evm.model.supercontig_2.182 PAC:16412544 Carica papaya 678  
evm.model.supercontig_6.152 PAC:16423323 Carica papaya 304  
evm.model.supercontig_84.63 PAC:16427347 Carica papaya 660  
29745.m000370 B9SUD0 PAC:16807703 Ricinus communis 160  
30024.m001689 B9RSD4 PAC:16815727 Ricinus communis 427  
30063.m001416 B9S055 PAC:16816373 Ricinus communis 635  
30131.m007150 B9RG62 PAC:16818972 Ricinus communis 221  
30131.m007201 B9RGB2 PAC:16819022 Ricinus communis 1096  
30169.m006437 B9RIC2 PAC:16821237 Ricinus communis 624  
30185.m000939 B9S1C7 PAC:16823043 Ricinus communis 477  
58916.m000022 B9TNA9 PAC:16829200 Ricinus communis 166  
29634.m002103 B9S6C9 PAC:16804244 Ricinus communis 443  
28119.m000039 B9TC02 PAC:16799971 Ricinus communis 236  
Cucsa.316070.1 PAC:16977101 Cucumis sativus 411  
Cucsa.048650.1 A0A0A0KL17 PAC:16953897 Cucumis sativus 430  
Cucsa.109070.1 PAC:16959793 Cucumis sativus 225  
Cucsa.065520.1 PAC:16955057 Cucumis sativus 819  
Cucsa.106420.1 PAC:16959438 Cucumis sativus 433  
Cucsa.106420.2 PAC:16959439 Cucumis sativus 428  
Cucsa.260430.1 A0A0A0L3E8 PAC:16973163 Cucumis sativus 626  
orange1.1g007334m PAC:18104607 Citrus sinensis 607  
orange1.1g006555m PAC:18104606 Citrus sinensis 640  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11014182
            10411886
            11430821