Protein Domain : IPR002073

Type:  Domain Name:  3'5'-cyclic nucleotide phosphodiesterase, catalytic domain
Description:  The cyclic nucleotide phosphodiesterases (PDE) comprise a group of enzymes that degrade the phosphodiester bond in the second messenger molecules cAMP and cGMP. They are divided into 11 families. They regulate the localisation, duration and amplitude of cyclic nucleotide signalling within subcellular domains. PDEs are therefore important for signal transduction.PDE enzymes are often targets for pharmacological inhibition due to their unique tissue distribution, structural properties, and functional properties. Inhibitors include: Roflumilast for chronic obstructive pulmonary disease and asthma [], Sildenafil for erectile dysfunction [] and Cilostazol for peripheral arterial occlusive disease [], amongst others.Retinal 3',5'-cGMP phosphodiesterase is located in photoreceptor outer segments: it is light activated, playing a pivotal role in signal transduction. In rod cells, PDE is oligomeric, comprising an alpha-, a beta- and 2 gamma-subunits, while in cones, PDE is a homodimer of alpha chains, which are associated with several smaller subunits. Both rod and cone PDEs catalyse the hydrolysis of cAMP or cGMP to the corresponding nucleoside 5' monophosphates, both enzymes also binding cGMP with high affinity. The cGMP-binding sites are located in theN-terminal half of the protein sequence, while the catalytic core resides in the C-terminal portion.This entry represents the catalytic domain of PDE which is multihelical and can be divided into three subdomains. Short Name:  PDEase_catalytic_dom

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF00233
G3DSA:1.10.1300.10

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0004114 IPR002073
GO:0007165 IPR002073

2 Ontology Annotations

GO Term Gene Name
GO:0004114 IPR002073
GO:0007165 IPR002073

1 Parent Features

DB identifier Type Name
IPR003607 Domain HD/PDEase domain

931 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
427736 D8T0K1 PAC:15413356 Selaginella moellendorffii 1167  
75074 D8QP71 PAC:15409791 Selaginella moellendorffii 478  
429570 D8T6L6 PAC:15417724 Selaginella moellendorffii 223  
evm.model.supercontig_27.238 PAC:16415621 Carica papaya 132  
evm.model.supercontig_79.58 PAC:16426344 Carica papaya 120  
evm.model.supercontig_89.45 PAC:16427920 Carica papaya 237  
Cucsa.063190.1 A0A0A0LWD7 PAC:16954978 Cucumis sativus 220  
Cucsa.162750.1 A0A0A0LPQ8 PAC:16965734 Cucumis sativus 234  
AT5G61280.1 Q9FLK5 PAC:19670853 Arabidopsis thaliana 263  
AT1G47740.1 Q8RXP3 PAC:19650963 Arabidopsis thaliana 279  
AT1G47740.2 Q8RXP3 PAC:19650964 Arabidopsis thaliana 279  
AT1G47300.1 Q9FX02 PAC:19654727 Arabidopsis thaliana 306  
Thhalv10025954m V4MFG7 PAC:20195596 Eutrema salsugineum 275  
Thhalv10027369m V4MKZ7 PAC:20193079 Eutrema salsugineum 222  
Thhalv10027062m V4MLC0 PAC:20195916 Eutrema salsugineum 338  
Thhalv10020558m V4NQ87 PAC:20183781 Eutrema salsugineum 504  
Thhalv10027901m V4LWE1 PAC:20189928 Eutrema salsugineum 243  
Thhalv10004785m V4KPB9 PAC:20200135 Eutrema salsugineum 263  
Thhalv10004898m V4KQ37 PAC:20198165 Eutrema salsugineum 218  
Thhalv10018712m V4MBW8 PAC:20191419 Eutrema salsugineum 380  
Lus10027609 PAC:23151318 Linum usitatissimum 580  
Lus10022984 PAC:23146164 Linum usitatissimum 114  
Potri.006G082100.2 A0A2K1ZYV0 PAC:27006936 Populus trichocarpa 229  
Gorai.001G002400.4 A0A0D2N2U6 PAC:26823946 Gossypium raimondii 217  
Gorai.001G002400.3 A0A0D2QH99 PAC:26823945 Gossypium raimondii 218  
Gorai.013G233100.1 A0A0D2SIT1 PAC:26787261 Gossypium raimondii 218  
Gorai.006G026100.1 A0A0D2RW18 PAC:26829149 Gossypium raimondii 516  
Gorai.007G234900.3 A0A0D2QY61 PAC:26780653 Gossypium raimondii 453  
Gorai.007G234900.2 A0A0D2SQ98 PAC:26780652 Gossypium raimondii 456  
Gorai.007G234900.4 A0A0D2SIR6 PAC:26780654 Gossypium raimondii 404  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            18447606
            18367027
            18436153