Protein Domain : IPR002942

Type:  Domain Name:  RNA-binding S4 domain
Description:  The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryoticribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridinesynthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterised, small proteins that may be involved intranslation regulation []. The S4 domain probably mediates binding to RNA []. Short Name:  S4_RNA-bd
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0 Child Features

1 Contains

DB identifier Type Name
IPR018079 Conserved_site Ribosomal protein S4, conserved site

4 Cross Referencess

Identifier
PF01479
PS50889
SM00363
G3DSA:3.10.290.10

8 Found Ins

DB identifier Type Name
IPR002307 Family Tyrosine-tRNA ligase
IPR017506 Family Photosystem II S4
IPR005710 Family Ribosomal protein S4/S9, eukaryotic/archaeal
IPR004538 Family Haemolysin A /rRNA methyltransferase TlyA
IPR000876 Family Ribosomal protein S4e
IPR006225 Family Pseudouridine synthase, RluC/RluD
IPR005709 Family Ribosomal protein S4, bacterial-type
IPR014330 Family RNA-binding S4-related,YaaA

1 GO Annotation

GO Term Gene Name
GO:0003723 IPR002942

1 Ontology Annotations

GO Term Gene Name
GO:0003723 IPR002942

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
236819 D8TDZ2 PAC:15412062 Selaginella moellendorffii 182  
137752 PAC:15422230 Selaginella moellendorffii 204  
137695 PAC:15421550 Selaginella moellendorffii 204  
148442 D8RMP7 PAC:15407709 Selaginella moellendorffii 258  
107344 D8S3A7 PAC:15419977 Selaginella moellendorffii 421  
111886 D8S9Y2 PAC:15413613 Selaginella moellendorffii 467  
157263 D8SPS2 PAC:15410658 Selaginella moellendorffii 198  
424516 D8SQ53 PAC:15402879 Selaginella moellendorffii 532  
168290 D8R6E1 PAC:15420788 Selaginella moellendorffii 359  
235037 D8ST37 PAC:15402971 Selaginella moellendorffii 179  
73367 D8QQQ7 PAC:15406176 Selaginella moellendorffii 245  
74302 D8QQ36 PAC:15408968 Selaginella moellendorffii 198  
45172 D8SY63 PAC:15411322 Selaginella moellendorffii 251  
evm.model.supercontig_1.326 PAC:16404262 Carica papaya 280  
evm.model.supercontig_14.239 PAC:16408746 Carica papaya 113  
evm.model.supercontig_192.11 PAC:16412180 Carica papaya 197  
evm.model.supercontig_26.268 PAC:16415214 Carica papaya 496  
evm.model.supercontig_46.6 PAC:16420527 Carica papaya 197  
evm.model.supercontig_466.9 PAC:16420600 Carica papaya 366  
evm.model.supercontig_50.159 PAC:16421620 Carica papaya 128  
evm.model.supercontig_53.128 PAC:16422190 Carica papaya 429  
evm.model.supercontig_70.92 PAC:16425382 Carica papaya 282  
evm.model.supercontig_80.70 PAC:16426797 Carica papaya 322  
29790.m000841 B9SIX4 PAC:16808585 Ricinus communis 182  
29813.m001450 B9S8S9 PAC:16809410 Ricinus communis 196  
29813.m001519 B9S8Z7 PAC:16809478 Ricinus communis 281  
29822.m003493 B9RUP5 PAC:16809862 Ricinus communis 196  
30063.m001412 B9S051 PAC:16816369 Ricinus communis 399  
30098.m001731 B9RPJ9 PAC:16817625 Ricinus communis 263  
30128.m008716 B9RG48 PAC:16818305 Ricinus communis 263  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9707415
            10093218