Protein Domain : IPR006630

Type:  Domain Name:  RNA-binding protein Lupus La
Description:  Human Ro ribonucleoproteins (RNPs) are composed of one of the four small Y RNAs and at least two proteins, Ro60 and La. The La protein is a 47 kDa polypeptide that frequently acts as an autoantigen in systemic lupus erythematosus and Sjogren's syndrome []. In the nucleus, La acts as a RNA polymerase III (RNAP III) transcription factor, while in the cytoplasm, La acts as a translation factor []. In the nucleus, La binds to the 3'UTR of nascent RNAP III transcripts to assist in folding and maturation []. In the cytoplasm, La recognises specific classes of mRNAs that contain a 5'-terminal oligopyrimidine (5'TOP) motif known to control protein synthesis []. The specific recognition is mediated by the N-terminal domain of La, which comprises a La motif and a RNA recognition motif (RRM). The La motif adopts an alpha/beta fold that comprises a winged-helix motif [].Homologous La domain-containing proteins have been identified in a wide range of organisms except Archaea, bacteria and viruses []. Short Name:  Lupus_La_RNA-bd

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF05383
PS50961
SM00715

1 Found In

DB identifier Type Name
IPR002344 Family Lupus La protein

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR011991 Domain Winged helix-turn-helix DNA-binding domain

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
35606 D8QWC1 PAC:15407645 Selaginella moellendorffii 270  
70782 D8QMH4 PAC:15422785 Selaginella moellendorffii 329  
168828 D8R7Q6 PAC:15402835 Selaginella moellendorffii 439  
39325 D8RBH3 PAC:15417206 Selaginella moellendorffii 93  
evm.model.supercontig_151.8 PAC:16409580 Carica papaya 524  
evm.model.supercontig_166.15 PAC:16410417 Carica papaya 415  
evm.model.supercontig_26.285 PAC:16415233 Carica papaya 443  
evm.model.supercontig_34.223 PAC:16417964 Carica papaya 693  
evm.model.supercontig_6.300 PAC:16423488 Carica papaya 338  
evm.model.supercontig_62.47 PAC:16424009 Carica papaya 419  
evm.model.supercontig_78.77 PAC:16426257 Carica papaya 459  
29780.m001325 B9S773 PAC:16808357 Ricinus communis 440  
29794.m003448 B9RS49 PAC:16808807 Ricinus communis 494  
30042.m000490 B9SSZ3 PAC:16816062 Ricinus communis 524  
30146.m003577 B9RQL3 PAC:16819697 Ricinus communis 476  
30154.m001131 B9S0U6 PAC:16820762 Ricinus communis 867  
30170.m014269 B9R8D8 PAC:16822102 Ricinus communis 449  
28962.m000438 B9SYS2 PAC:16802037 Ricinus communis 471  
29670.m000149 PAC:16805277 Ricinus communis 270  
Cucsa.322820.1 PAC:16977833 Cucumis sativus 270  
Cucsa.343170.1 A0A0A0LH68 PAC:16979497 Cucumis sativus 540  
Cucsa.343170.2 PAC:16979498 Cucumis sativus 529  
Cucsa.343170.3 PAC:16979499 Cucumis sativus 426  
Cucsa.043850.1 PAC:16953109 Cucumis sativus 529  
Cucsa.043860.1 PAC:16953110 Cucumis sativus 567  
Cucsa.043860.2 PAC:16953111 Cucumis sativus 457  
Cucsa.085300.1 PAC:16956653 Cucumis sativus 423  
Cucsa.085300.3 PAC:16956655 Cucumis sativus 414  
Cucsa.047680.5 PAC:16953722 Cucumis sativus 381  
Cucsa.047680.6 PAC:16953723 Cucumis sativus 334  

6 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15016896
            14636586
            14690589
            15004549
            7799435
            15048103