Protein Domain : IPR027237

Type:  Family Name:  Pre-mRNA-processing protein PRP40
Description:  This entry represent pre-mRNA-processing PRPF40 protein family, including PRP40A/PRP40B/PRP40/PRPF40A. They may be involved in pre-mRNA splicing []. In yeasts, PRP40 is associated with snRNP U1 and required for pre-spliceosome formation, which is the first step of pre-mRNA splicing []. In Arabidopsis, PRP40A/B is a component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes []. In humans, PRPF40A is involved in cytoskeletal organisation, cell morphology and migration []. Short Name:  PRP40

0 Child Features

0 Contains

1 Cross References

Identifier
PTHR11864:SF0

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

957 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
402621 D8QMI0 PAC:15405773 Selaginella moellendorffii 799  
evm.model.supercontig_524.1 PAC:16422143 Carica papaya 94  
30170.m013676 B9R6W2 PAC:16821524 Ricinus communis 970  
AT3G19670.1 F4JCC1 PAC:19662765 Arabidopsis thaliana 992  
AT1G44910.2 B6EUA9 PAC:19653606 Arabidopsis thaliana 926  
AT1G44910.1 B6EUA9 PAC:19653605 Arabidopsis thaliana 958  
Thhalv10019995m V4LZH1 PAC:20181783 Eutrema salsugineum 978  
Thhalv10011213m V4KUF2 PAC:20184249 Eutrema salsugineum 957  
Thhalv10011212m V4KIH6 PAC:20184248 Eutrema salsugineum 958  
Lus10018659 PAC:23176194 Linum usitatissimum 921  
Lus10007723 PAC:23149229 Linum usitatissimum 1020  
Potri.002G115500.1 PAC:27023125 Populus trichocarpa 108  
Potri.014G013100.6 PAC:27034261 Populus trichocarpa 837  
Potri.014G013100.3 A0A2K1XNQ6 PAC:27034257 Populus trichocarpa 1019  
Potri.014G013100.4 A0A2K1XNR4 PAC:27034258 Populus trichocarpa 1009  
Potri.014G013100.1 A0A2K1XNQ6 PAC:27034256 Populus trichocarpa 1019  
Potri.014G013100.2 PAC:27034259 Populus trichocarpa 1007  
Potri.014G013100.7 PAC:27034262 Populus trichocarpa 594  
Potri.014G013100.5 PAC:27034260 Populus trichocarpa 838  
Gorai.010G027200.1 A0A0D2U4X1 PAC:26759057 Gossypium raimondii 1026  
47676 I0YWH3 PAC:27388784 Coccomyxa subellipsoidea C-169 716  
129260 PAC:27344546 Micromonas pusilla CCMP1545 461  
64702 C1EIU3 PAC:27397182 Micromonas sp RCC299 727  
27364 A4S762 PAC:27419876 Ostreococcus lucimarinus 542  
Migut.N02796.1.p PAC:28924078 Mimulus guttatus 774  
Araha.3986s0001.1.p PAC:28854196 Arabidopsis halleri 907  
Araha.5366s0019.1.p PAC:28845144 Arabidopsis halleri 416  
Cagra.18800s0002.1.p PAC:28893825 Capsella grandiflora 966  
Cagra.6943s0018.1.p PAC:28894556 Capsella grandiflora 940  
Glyma.17G233000.1.p I1MXF9 PAC:30482409 Glycine max 1008  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9700202
            9150140
            19467629
            21834987