Protein Domain : IPR020850

Type:  Domain Name:  GTPase effector domain, GED
Description:  Dynamin superfamily members are large GTPases, conserved through evolution, mainly described as mechanochemical enzymes involved in membrane scission events. The dynamin superfamily has been subdivided into several subgroups based on domain organisation: classical dynamin, dynamin-like proteins (Dlps), Mc proteins, optic atrophy 1 protein (OPA1), Mitofusins, guanylate-binding proteins (GBP) and alastatins. All members display a common architecture: a large GTPase (see ) domain followed by a 'middle domain' of ill-defined function and a downstream coiled-coil GTPase effector domain (GED) that functions in higher order assembly and as a GTPase activating protein (GAP) for dynamin's GTPase activity. Most members contain additional domains that characterise the different subgroups. For example, classical dynamins contain a lipid binding Pleckstrin-homology (PH) (see ) domain between the middle domain and the GED domain as well as a C-terminal proline-arginine rich domain (PRD) that interacts with numerous SH3 domain-containing binding partners while Dlps lack the PRD but have a PH domain, which may, however, be highly divergent. These various domains confer a variety of biochemical properties and cellular localisations to dynamin, that may explain the diversity of their biological implications in endocytosis, intracellular traffic, organelle fission and fusion, cytokinesis and pathogen resistance [, , , ].The GED is seen to be largely helical in nature, and its oligomerisation occurs via intermolecular packing of the helices []. Short Name:  GTPase_effector_domain_GED

1 Child Features

DB identifier Type Name
IPR003130 Domain Dynamin GTPase effector

0 Contains

1 Cross References

Identifier
PS51388

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
171046 D8RFP1 PAC:15405828 Selaginella moellendorffii 915  
101670 D8RUJ2 PAC:15404689 Selaginella moellendorffii 800  
404911 D8QXS3 PAC:15414054 Selaginella moellendorffii 985  
266589 D8QNS8 PAC:15409184 Selaginella moellendorffii 608  
437242 D8QPL2 PAC:15416680 Selaginella moellendorffii 929  
183216 D8SVZ5 PAC:15420391 Selaginella moellendorffii 612  
90013 D8RB68 PAC:15409434 Selaginella moellendorffii 607  
77824 D8QSV0 PAC:15421530 Selaginella moellendorffii 896  
evm.TU.contig_41055.1 PAC:16431571 Carica papaya 80  
evm.model.supercontig_1.1 PAC:16404010 Carica papaya 79  
evm.model.supercontig_113.8 PAC:16406085 Carica papaya 784  
evm.model.supercontig_20.20 PAC:16413004 Carica papaya 117  
evm.model.supercontig_52.64 PAC:16422089 Carica papaya 614  
evm.model.supercontig_74.90 PAC:16425786 Carica papaya 617  
evm.model.supercontig_79.22 PAC:16426305 Carica papaya 610  
29709.m001211 B9SKH8 PAC:16806428 Ricinus communis 618  
29742.m001419 B9SBH8 PAC:16807650 Ricinus communis 609  
29848.m004504 B9RNS3 PAC:16811160 Ricinus communis 797  
30128.m009018 B9RFU7 PAC:16818601 Ricinus communis 675  
30148.m001407 B9SD99 PAC:16820553 Ricinus communis 667  
30190.m010847 B9RCT9 PAC:16823214 Ricinus communis 610  
29628.m000770 B9SS14 PAC:16803913 Ricinus communis 614  
29506.m000169 B9T3E4 PAC:16802980 Ricinus communis 837  
27647.m000182 B9T4N0 PAC:16798899 Ricinus communis 622  
Cucsa.331870.1 PAC:16978237 Cucumis sativus 822  
Cucsa.313530.1 PAC:16977016 Cucumis sativus 613  
Cucsa.313530.2 PAC:16977017 Cucumis sativus 528  
Cucsa.088510.1 PAC:16957017 Cucumis sativus 920  
Cucsa.114940.1 A0A0A0KV35 PAC:16960453 Cucumis sativus 610  
Cucsa.114940.2 A0A0A0KV35 PAC:16960454 Cucumis sativus 610  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15004222
            16403025
            16938290
            17533148