Protein Domain : IPR010908

Type:  Domain Name:  Longin domain
Description:  VAMPs (and its homologue synaptobrevins) define a group of SNARE proteins that contain a C-terminal coiled-coil/SNARE domain, in combination with variable N-terminal domains that are used to classify VAMPs: those containing longin N-terminal domains (~150 aa) are referred to as longins, while those with shorter N-termini are referred to as brevins []. Longins are the only type of VAMP protein found in all eukaryotes, suggesting that their longin domain is essential. The longin domain is thought to exert a regulatory function. Longin domains have been shown to share the same structural fold, a profilin-like globular domain consisting of a five-stranded antiparallel beta-sheet that is sandwiched by an alpha-helix on one side, and two alpha-helices on the other (beta(2)-alpha-beta(3)-alpha(2)). Short Name:  Longin_dom

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF13774
PS50859
G3DSA:3.30.450.50

0 Found In

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR011012 Domain Longin-like domain

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
412446 D8RLI4 PAC:15411580 Selaginella moellendorffii 264  
79058 D8QVK1 PAC:15421343 Selaginella moellendorffii 210  
414731 D8RTR8 PAC:15419659 Selaginella moellendorffii 389  
166326 D8QX58 PAC:15415614 Selaginella moellendorffii 206  
80138 D8QYH3 PAC:15402969 Selaginella moellendorffii 219  
228494 D8S389 PAC:15407719 Selaginella moellendorffii 219  
164037 D8QR69 PAC:15407312 Selaginella moellendorffii 220  
235084 D8STL1 PAC:15403081 Selaginella moellendorffii 218  
170304 D8RCT6 PAC:15405090 Selaginella moellendorffii 220  
evm.TU.contig_37721.1 PAC:16431067 Carica papaya 64  
evm.model.supercontig_100.20 PAC:16404732 Carica papaya 141  
evm.model.supercontig_142.3 PAC:16408958 Carica papaya 265  
evm.model.supercontig_195.15 PAC:16412266 Carica papaya 191  
evm.model.supercontig_217.14 PAC:16413799 Carica papaya 220  
evm.model.supercontig_25.155 PAC:16414751 Carica papaya 213  
evm.model.supercontig_3.94 PAC:16416882 Carica papaya 272  
evm.model.supercontig_43.124 PAC:16419934 Carica papaya 199  
evm.model.supercontig_46.121 PAC:16420402 Carica papaya 199  
evm.model.supercontig_46.45 PAC:16420511 Carica papaya 222  
evm.model.supercontig_54.3 PAC:16422380 Carica papaya 190  
evm.model.supercontig_59.108 PAC:16423114 Carica papaya 219  
evm.model.supercontig_8.171 PAC:16426454 Carica papaya 219  
29726.m004030 B9RT39 PAC:16806741 Ricinus communis 221  
29727.m000478 B9ST66 PAC:16806850 Ricinus communis 233  
29737.m001221 B9SBY5 PAC:16807240 Ricinus communis 199  
29848.m004605 B9RP23 PAC:16811260 Ricinus communis 220  
29873.m000158 B9SVX6 PAC:16811954 Ricinus communis 221  
29904.m002973 B9RWK6 PAC:16812618 Ricinus communis 219  
30024.m001698 B9RSE2 PAC:16815735 Ricinus communis 280  
30055.m001590 B9SCW7 PAC:16816221 Ricinus communis 220  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12914952