Protein Domain : IPR001790

Type:  Family Name:  Ribosomal protein L10P
Description:  Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ].On the basis of sequence similarities the following prokaryotic and eukaryotic ribosomal proteins can be grouped: Bacterial 50S ribosomal protein L10;Archaebacterial acidic ribosomal protein P0 homologue (L10E);Eukaryotic 60S ribosomal protein P0 (L10E).This entry represents the ribosomal protein L10P family, with includes the above mentioned ribosomal proteins. Short Name:  Ribosomal_L10P

3 Child Features

DB identifier Type Name
IPR030670 Family 60S acidic ribosomal protein P0
IPR022973 Family Ribosomal protein L10
IPR022909 Family 50S ribosomal protein L10, archaea

2 Contains

DB identifier Type Name
IPR013522 Domain Ribosomal protein L10, N-terminal, archaeal
IPR002363 Conserved_site Ribosomal protein L10, eubacterial, conserved site

1 Cross References

Identifier
PF00466

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0042254 IPR001790
GO:0005622 IPR001790

2 Ontology Annotations

GO Term Gene Name
GO:0042254 IPR001790
GO:0005622 IPR001790

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
149765 D8RTH0 PAC:15413154 Selaginella moellendorffii 318  
233811 D8SEQ4 PAC:15403184 Selaginella moellendorffii 181  
164004 D8QR22 PAC:15407247 Selaginella moellendorffii 227  
229877 D8QQI4 PAC:15413870 Selaginella moellendorffii 323  
425112 D8SS19 PAC:15402726 Selaginella moellendorffii 146  
49101 D8T205 PAC:15422751 Selaginella moellendorffii 144  
437282 D8QPV7 PAC:15416789 Selaginella moellendorffii 321  
evm.model.supercontig_1.279 PAC:16404209 Carica papaya 233  
evm.model.supercontig_112.41 PAC:16405942 Carica papaya 321  
evm.model.supercontig_19.207 PAC:16411947 Carica papaya 310  
evm.model.supercontig_2.27 PAC:16412641 Carica papaya 229  
29801.m003100 B9RY97 PAC:16808950 Ricinus communis 232  
30116.m000391 B9SRK3 PAC:16818057 Ricinus communis 182  
29681.m001324 B9SI03 PAC:16805611 Ricinus communis 323  
29669.m000815 B9SLK4 PAC:16805242 Ricinus communis 320  
Cucsa.368670.1 A0A0A0KM27 PAC:16981708 Cucumis sativus 320  
Cucsa.368670.2 PAC:16981709 Cucumis sativus 319  
Cucsa.147000.1 A0A0A0LV50 PAC:16964007 Cucumis sativus 320  
Cucsa.165910.1 A0A0A0KLL5 PAC:16966099 Cucumis sativus 235  
orange1.1g035720m A0A067DF65 PAC:18128960 Citrus sinensis 217  
orange1.1g020952m A0A067FNS1 PAC:18138282 Citrus sinensis 319  
orange1.1g021064m A0A067FS98 PAC:18138283 Citrus sinensis 318  
orange1.1g036252m A0A067G0Q0 PAC:18138032 Citrus sinensis 318  
orange1.1g027713m A0A067FKJ6 PAC:18095462 Citrus sinensis 220  
orange1.1g030853m A0A067FKF3 PAC:18095463 Citrus sinensis 170  
orange1.1g030878m A0A067FKF3 PAC:18095464 Citrus sinensis 170  
AT5G13510.1 Q9FY50 PAC:19668000 Arabidopsis thaliana 220  
AT3G12370.1 Q9LHH1 PAC:19662958 Arabidopsis thaliana 171  
AT3G09200.1 Q42112 PAC:19659168 Arabidopsis thaliana 320  
AT3G11250.1 P57691 PAC:19660086 Arabidopsis thaliana 323  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11297922
            11290319
            11114498