Gene : Pp3c11_10320 P. patens v3.3
Defline:  (1 of 1) PTHR15243 - SERINE/THREONINE-PROTEIN KINASE 19 Genomic Order:  494
Name:  ? Pp3c11_10320 Secondary Identifier:  ? PAC:32959118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c11_10320 0.5kb upstream 0.5kb upstream 2948 true Chr11: 6723812-6726759 Physcomitrium patens
Pp3c11_10320 0.5kb upstream 0.5kb upstream 500 false Chr11: 6723812-6724311 Physcomitrium patens
Pp3c11_10320 0.5kb downstream 0.5kb downstream 2948 true Chr11: 6724312-6727259 Physcomitrium patens
Pp3c11_10320 0.5kb downstream 0.5kb downstream 500 false Chr11: 6726760-6727259 Physcomitrium patens
Pp3c11_10320 1.0kb upstream 1.0kb upstream 3448 true Chr11: 6723312-6726759 Physcomitrium patens
Pp3c11_10320 1.0kb upstream 1.0kb upstream 1000 false Chr11: 6723312-6724311 Physcomitrium patens
Pp3c11_10320 1.0kb downstream 1.0kb downstream 3448 true Chr11: 6724312-6727759 Physcomitrium patens
Pp3c11_10320 1.0kb downstream 1.0kb downstream 1000 false Chr11: 6726760-6727759 Physcomitrium patens
Pp3c11_10320 2.0kb upstream 2.0kb upstream 4448 true Chr11: 6722312-6726759 Physcomitrium patens
Pp3c11_10320 2.0kb upstream 2.0kb upstream 2000 false Chr11: 6722312-6724311 Physcomitrium patens
Pp3c11_10320 2.0kb downstream 2.0kb downstream 4448 true Chr11: 6724312-6728759 Physcomitrium patens
Pp3c11_10320 2.0kb downstream 2.0kb downstream 2000 false Chr11: 6726760-6728759 Physcomitrium patens
Pp3c11_10320 5.0kb upstream 5.0kb upstream 7448 true Chr11: 6719312-6726759 Physcomitrium patens
Pp3c11_10320 5.0kb upstream 5.0kb upstream 5000 false Chr11: 6719312-6724311 Physcomitrium patens
Pp3c11_10320 5.0kb downstream 5.0kb downstream 7448 true Chr11: 6724312-6731759 Physcomitrium patens
Pp3c11_10320 5.0kb downstream 5.0kb downstream 5000 false Chr11: 6726760-6731759 Physcomitrium patens
Pp3c11_10320 10.0kb upstream 10.0kb upstream 12448 true Chr11: 6714312-6726759 Physcomitrium patens
Pp3c11_10320 10.0kb upstream 10.0kb upstream 10000 false Chr11: 6714312-6724311 Physcomitrium patens
Pp3c11_10320 10.0kb downstream 10.0kb downstream 12448 true Chr11: 6724312-6736759 Physcomitrium patens
Pp3c11_10320 10.0kb downstream 10.0kb downstream 10000 false Chr11: 6726760-6736759 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347179 5274 Embryophyte View MSA
123424937 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.551        
cufflinks 5.116        
cufflinks 8.716        
cufflinks 5.001        
cufflinks 3.851       Low
cufflinks 8.657        
cufflinks 54.668     High High
cufflinks 6.289        
cufflinks 8.104        
cufflinks 5.27        
cufflinks 6.269        
cufflinks 55.115     High High
cufflinks 7.519        
cufflinks 15.431        
cufflinks 6.288        
cufflinks 7.286        
cufflinks 9.132        
cufflinks 51.451     High High
cufflinks 5.029        
cufflinks 10.17        
cufflinks 12.04        
cufflinks 10.934        
cufflinks 5.262        
cufflinks 6.262        
cufflinks 6.741        
cufflinks 5.7        
cufflinks 7.409        
cufflinks 5.509        
cufflinks 7.206        
cufflinks 6.691        

0 Strain