Gene : Pp3c9_26100 P. patens v3.3
Defline:  (1 of 1) PTHR10992:SF743 - ALPHA/BETA-HYDROLASE DOMAIN-CONTAINING PROTEIN Genomic Order:  1189
Name:  ? Pp3c9_26100 Secondary Identifier:  ? PAC:32912435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c9_26100 0.5kb upstream 0.5kb upstream 6135 true Chr09: 17750541-17756675 Physcomitrium patens
Pp3c9_26100 0.5kb upstream 0.5kb upstream 500 false Chr09: 17756176-17756675 Physcomitrium patens
Pp3c9_26100 0.5kb downstream 0.5kb downstream 6135 true Chr09: 17750041-17756175 Physcomitrium patens
Pp3c9_26100 0.5kb downstream 0.5kb downstream 500 false Chr09: 17750041-17750540 Physcomitrium patens
Pp3c9_26100 1.0kb upstream 1.0kb upstream 6635 true Chr09: 17750541-17757175 Physcomitrium patens
Pp3c9_26100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 17756176-17757175 Physcomitrium patens
Pp3c9_26100 1.0kb downstream 1.0kb downstream 6635 true Chr09: 17749541-17756175 Physcomitrium patens
Pp3c9_26100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 17749541-17750540 Physcomitrium patens
Pp3c9_26100 2.0kb upstream 2.0kb upstream 7635 true Chr09: 17750541-17758175 Physcomitrium patens
Pp3c9_26100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 17756176-17758175 Physcomitrium patens
Pp3c9_26100 2.0kb downstream 2.0kb downstream 7635 true Chr09: 17748541-17756175 Physcomitrium patens
Pp3c9_26100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 17748541-17750540 Physcomitrium patens
Pp3c9_26100 5.0kb upstream 5.0kb upstream 10635 true Chr09: 17750541-17761175 Physcomitrium patens
Pp3c9_26100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 17756176-17761175 Physcomitrium patens
Pp3c9_26100 5.0kb downstream 5.0kb downstream 10635 true Chr09: 17745541-17756175 Physcomitrium patens
Pp3c9_26100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 17745541-17750540 Physcomitrium patens
Pp3c9_26100 10.0kb upstream 10.0kb upstream 15635 true Chr09: 17750541-17766175 Physcomitrium patens
Pp3c9_26100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 17756176-17766175 Physcomitrium patens
Pp3c9_26100 10.0kb downstream 10.0kb downstream 15635 true Chr09: 17740541-17756175 Physcomitrium patens
Pp3c9_26100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 17740541-17750540 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123428977 5275 Viridiplantae View MSA
121344597 5274 Embryophyte View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.482        
cufflinks 1.182        
cufflinks 0.608       Low
cufflinks 1.06        
cufflinks 0.716        
cufflinks 1.535       High
cufflinks 0.753        
cufflinks 0.576       Low
cufflinks 0.953        
cufflinks 1.034        
cufflinks 0.95        
cufflinks 1.468        
cufflinks 0.864        
cufflinks 1.05        
cufflinks 1.081        
cufflinks 0.78        
cufflinks 1.537       High
cufflinks 0.683        
cufflinks 0.77        
cufflinks 0.69        
cufflinks 0.599       Low
cufflinks 1.293        
cufflinks 0.802        
cufflinks 1.092        
cufflinks 2.633       High
cufflinks 1.576       High
cufflinks 1.031        
cufflinks 0.781        
cufflinks 0.593       Low
cufflinks 0.541       Low

0 Strain