Gene : Pp3c4_17140 P. patens v3.3
Defline:  (1 of 1) PTHR21694:SF18 - COILED-COIL DOMAIN-CONTAINING PROTEIN 114 Genomic Order:  809
Name:  ? Pp3c4_17140 Secondary Identifier:  ? PAC:32920457
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_17140 0.5kb upstream 0.5kb upstream 4574 true Chr04: 11807901-11812474 Physcomitrium patens
Pp3c4_17140 0.5kb upstream 0.5kb upstream 500 false Chr04: 11811975-11812474 Physcomitrium patens
Pp3c4_17140 0.5kb downstream 0.5kb downstream 4574 true Chr04: 11807401-11811974 Physcomitrium patens
Pp3c4_17140 0.5kb downstream 0.5kb downstream 500 false Chr04: 11807401-11807900 Physcomitrium patens
Pp3c4_17140 1.0kb upstream 1.0kb upstream 5074 true Chr04: 11807901-11812974 Physcomitrium patens
Pp3c4_17140 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11811975-11812974 Physcomitrium patens
Pp3c4_17140 1.0kb downstream 1.0kb downstream 5074 true Chr04: 11806901-11811974 Physcomitrium patens
Pp3c4_17140 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11806901-11807900 Physcomitrium patens
Pp3c4_17140 2.0kb upstream 2.0kb upstream 6074 true Chr04: 11807901-11813974 Physcomitrium patens
Pp3c4_17140 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11811975-11813974 Physcomitrium patens
Pp3c4_17140 2.0kb downstream 2.0kb downstream 6074 true Chr04: 11805901-11811974 Physcomitrium patens
Pp3c4_17140 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11805901-11807900 Physcomitrium patens
Pp3c4_17140 5.0kb upstream 5.0kb upstream 9074 true Chr04: 11807901-11816974 Physcomitrium patens
Pp3c4_17140 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11811975-11816974 Physcomitrium patens
Pp3c4_17140 5.0kb downstream 5.0kb downstream 9074 true Chr04: 11802901-11811974 Physcomitrium patens
Pp3c4_17140 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11802901-11807900 Physcomitrium patens
Pp3c4_17140 10.0kb upstream 10.0kb upstream 14074 true Chr04: 11807901-11821974 Physcomitrium patens
Pp3c4_17140 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11811975-11821974 Physcomitrium patens
Pp3c4_17140 10.0kb downstream 10.0kb downstream 14074 true Chr04: 11797901-11811974 Physcomitrium patens
Pp3c4_17140 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11797901-11807900 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121327692 5274 Embryophyte Singleton cluster - no MSA
123364718 5275 Viridiplantae Singleton cluster - no MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.012     Low  
cufflinks 0.004     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.005     Low  
cufflinks 0.006     Low  
cufflinks 0.002     Low Low
cufflinks 0.002     Low Low
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.163       High

0 Strain