Gene : Pp3c4_16120 P. patens v3.3
Genomic Order:  755 Name:  ? Pp3c4_16120
Secondary Identifier:  ? PAC:32920624
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

8 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c4_16120 0.5kb upstream 0.5kb upstream 3918 true Chr04: 11138558-11142475 Physcomitrium patens
Pp3c4_16120 0.5kb upstream 0.5kb upstream 500 false Chr04: 11141976-11142475 Physcomitrium patens
Pp3c4_16120 0.5kb downstream 0.5kb downstream 3918 true Chr04: 11138058-11141975 Physcomitrium patens
Pp3c4_16120 0.5kb downstream 0.5kb downstream 500 false Chr04: 11138058-11138557 Physcomitrium patens
Pp3c4_16120 1.0kb upstream 1.0kb upstream 4418 true Chr04: 11138558-11142975 Physcomitrium patens
Pp3c4_16120 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11141976-11142975 Physcomitrium patens
Pp3c4_16120 1.0kb downstream 1.0kb downstream 4418 true Chr04: 11137558-11141975 Physcomitrium patens
Pp3c4_16120 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11137558-11138557 Physcomitrium patens
Pp3c4_16120 2.0kb upstream 2.0kb upstream 5418 true Chr04: 11138558-11143975 Physcomitrium patens
Pp3c4_16120 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11141976-11143975 Physcomitrium patens
Pp3c4_16120 2.0kb downstream 2.0kb downstream 5418 true Chr04: 11136558-11141975 Physcomitrium patens
Pp3c4_16120 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11136558-11138557 Physcomitrium patens
Pp3c4_16120 5.0kb upstream 5.0kb upstream 8418 true Chr04: 11138558-11146975 Physcomitrium patens
Pp3c4_16120 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11141976-11146975 Physcomitrium patens
Pp3c4_16120 5.0kb downstream 5.0kb downstream 8418 true Chr04: 11133558-11141975 Physcomitrium patens
Pp3c4_16120 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11133558-11138557 Physcomitrium patens
Pp3c4_16120 10.0kb upstream 10.0kb upstream 13418 true Chr04: 11138558-11151975 Physcomitrium patens
Pp3c4_16120 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11141976-11151975 Physcomitrium patens
Pp3c4_16120 10.0kb downstream 10.0kb downstream 13418 true Chr04: 11128558-11141975 Physcomitrium patens
Pp3c4_16120 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11128558-11138557 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121347236 5274 Embryophyte View MSA
123380516 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.271        
cufflinks 1.645        
cufflinks 2.0        
cufflinks 1.276        
cufflinks 1.45        
cufflinks 1.561        
cufflinks 1.862        
cufflinks 1.369        
cufflinks 1.29        
cufflinks 1.548        
cufflinks 1.708        
cufflinks 2.847       High
cufflinks 2.226        
cufflinks 1.827        
cufflinks 2.113        
cufflinks 0.48       Low
cufflinks 1.599        
cufflinks 1.455        
cufflinks 2.798       High
cufflinks 1.294        
cufflinks 1.623        
cufflinks 1.32        
cufflinks 2.378       High
cufflinks 0.569       Low
cufflinks 1.47        
cufflinks 1.655        
cufflinks 2.716       High
cufflinks 1.722        
cufflinks 1.473        
cufflinks 2.354       High

0 Strain