Gene : Pp3c3_28240 P. patens v3.3
Defline:  (1 of 3) PTHR21625:SF0 - COILED-COIL DOMAIN-CONTAINING PROTEIN 65 Genomic Order:  1324
Name:  ? Pp3c3_28240 Secondary Identifier:  ? PAC:32944561
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c3_28240 0.5kb upstream 0.5kb upstream 4220 true Chr03: 19125265-19129484 Physcomitrium patens
Pp3c3_28240 0.5kb upstream 0.5kb upstream 500 false Chr03: 19128985-19129484 Physcomitrium patens
Pp3c3_28240 0.5kb downstream 0.5kb downstream 4220 true Chr03: 19124765-19128984 Physcomitrium patens
Pp3c3_28240 0.5kb downstream 0.5kb downstream 500 false Chr03: 19124765-19125264 Physcomitrium patens
Pp3c3_28240 1.0kb upstream 1.0kb upstream 4720 true Chr03: 19125265-19129984 Physcomitrium patens
Pp3c3_28240 1.0kb upstream 1.0kb upstream 1000 false Chr03: 19128985-19129984 Physcomitrium patens
Pp3c3_28240 1.0kb downstream 1.0kb downstream 4720 true Chr03: 19124265-19128984 Physcomitrium patens
Pp3c3_28240 1.0kb downstream 1.0kb downstream 1000 false Chr03: 19124265-19125264 Physcomitrium patens
Pp3c3_28240 2.0kb upstream 2.0kb upstream 5720 true Chr03: 19125265-19130984 Physcomitrium patens
Pp3c3_28240 2.0kb upstream 2.0kb upstream 2000 false Chr03: 19128985-19130984 Physcomitrium patens
Pp3c3_28240 2.0kb downstream 2.0kb downstream 5720 true Chr03: 19123265-19128984 Physcomitrium patens
Pp3c3_28240 2.0kb downstream 2.0kb downstream 2000 false Chr03: 19123265-19125264 Physcomitrium patens
Pp3c3_28240 5.0kb upstream 5.0kb upstream 8720 true Chr03: 19125265-19133984 Physcomitrium patens
Pp3c3_28240 5.0kb upstream 5.0kb upstream 5000 false Chr03: 19128985-19133984 Physcomitrium patens
Pp3c3_28240 5.0kb downstream 5.0kb downstream 8720 true Chr03: 19120265-19128984 Physcomitrium patens
Pp3c3_28240 5.0kb downstream 5.0kb downstream 5000 false Chr03: 19120265-19125264 Physcomitrium patens
Pp3c3_28240 10.0kb upstream 10.0kb upstream 13720 true Chr03: 19125265-19138984 Physcomitrium patens
Pp3c3_28240 10.0kb upstream 10.0kb upstream 10000 false Chr03: 19128985-19138984 Physcomitrium patens
Pp3c3_28240 10.0kb downstream 10.0kb downstream 13720 true Chr03: 19115265-19128984 Physcomitrium patens
Pp3c3_28240 10.0kb downstream 10.0kb downstream 10000 false Chr03: 19115265-19125264 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121342562 5274 Embryophyte View MSA
123427310 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.02     Low  
cufflinks 0.037     Low  
cufflinks 0.004     Low Low
cufflinks 0.018     Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.118       High
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.037     Low  
cufflinks 0.014     Low  
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low High
cufflinks 0.03     Low  
cufflinks 0.033     Low  
cufflinks 0.036     Low  
cufflinks 0.041     Low  
cufflinks 0.007     Low Low
cufflinks 0.043     Low  
cufflinks 0.017     Low  
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.119       High

0 Strain