Gene : Pp3c2_10640 P. patens v3.3
Defline:  (1 of 1) PTHR15245//PTHR15245:SF25 - SYMPLEKIN-RELATED Genomic Order:  549
Name:  ? Pp3c2_10640 Secondary Identifier:  ? PAC:32933941
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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9 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Pp3c2_10640 0.5kb upstream 0.5kb upstream 14009 true Chr02: 7275986-7289994 Physcomitrium patens
Pp3c2_10640 0.5kb upstream 0.5kb upstream 500 false Chr02: 7275986-7276485 Physcomitrium patens
Pp3c2_10640 0.5kb downstream 0.5kb downstream 14009 true Chr02: 7276486-7290494 Physcomitrium patens
Pp3c2_10640 0.5kb downstream 0.5kb downstream 500 false Chr02: 7289995-7290494 Physcomitrium patens
Pp3c2_10640 1.0kb upstream 1.0kb upstream 14509 true Chr02: 7275486-7289994 Physcomitrium patens
Pp3c2_10640 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7275486-7276485 Physcomitrium patens
Pp3c2_10640 1.0kb downstream 1.0kb downstream 14509 true Chr02: 7276486-7290994 Physcomitrium patens
Pp3c2_10640 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7289995-7290994 Physcomitrium patens
Pp3c2_10640 2.0kb upstream 2.0kb upstream 15509 true Chr02: 7274486-7289994 Physcomitrium patens
Pp3c2_10640 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7274486-7276485 Physcomitrium patens
Pp3c2_10640 2.0kb downstream 2.0kb downstream 15509 true Chr02: 7276486-7291994 Physcomitrium patens
Pp3c2_10640 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7289995-7291994 Physcomitrium patens
Pp3c2_10640 5.0kb upstream 5.0kb upstream 18509 true Chr02: 7271486-7289994 Physcomitrium patens
Pp3c2_10640 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7271486-7276485 Physcomitrium patens
Pp3c2_10640 5.0kb downstream 5.0kb downstream 18509 true Chr02: 7276486-7294994 Physcomitrium patens
Pp3c2_10640 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7289995-7294994 Physcomitrium patens
Pp3c2_10640 10.0kb upstream 10.0kb upstream 23509 true Chr02: 7266486-7289994 Physcomitrium patens
Pp3c2_10640 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7266486-7276485 Physcomitrium patens
Pp3c2_10640 10.0kb downstream 10.0kb downstream 23509 true Chr02: 7276486-7299994 Physcomitrium patens
Pp3c2_10640 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7289995-7299994 Physcomitrium patens

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121344612 5274 Embryophyte View MSA
123424208 5275 Viridiplantae View MSA

32 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.725     High  
cufflinks 47.833     High  
cufflinks 44.475     High  
cufflinks 54.254     High  
cufflinks 50.988     High  
cufflinks 41.479     High  
cufflinks 37.864     High Low
cufflinks 38.605     High Low
cufflinks 52.132     High  
cufflinks 38.947     High Low
cufflinks 81.927     High High
cufflinks 50.678     High  
cufflinks 53.238     High  
cufflinks 35.159     High Low
cufflinks 43.662     High  
cufflinks 45.458     High  
cufflinks 51.421     High  
cufflinks 44.106     High  
cufflinks 80.411     High High
cufflinks 44.826     High  
cufflinks 54.39     High  
cufflinks 38.542     High Low
cufflinks 52.675     High  
cufflinks 44.872     High  
cufflinks 57.774     High High
cufflinks 45.207     High  
cufflinks 57.972     High High
cufflinks 49.046     High  
cufflinks 46.21     High  
cufflinks 44.338     High  

0 Strain